Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.3■□□□□ 0.84
Rfx5Q9JL61 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx5Q9JL61 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx5Q9JL61 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx5Q9JL61 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.29■□□□□ 0.84
Rfx5Q9JL61 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx5Q9JL61 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Rfx5Q9JL61 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx5Q9JL61 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx5Q9JL61 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx5Q9JL61 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx5Q9JL61 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx5Q9JL61 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx5Q9JL61 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx5Q9JL61 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rfx5Q9JL61 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.28■□□□□ 0.84
Rfx5Q9JL61 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfx5Q9JL61 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.28■□□□□ 0.84
Rfx5Q9JL61 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfx5Q9JL61 AV356131-201ENSMUST00000206201 750 ntBASIC20.28■□□□□ 0.84
Rfx5Q9JL61 Gm18671-201ENSMUST00000214826 683 ntBASIC20.28■□□□□ 0.84
Rfx5Q9JL61 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfx5Q9JL61 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rfx5Q9JL61 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Rfx5Q9JL61 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rfx5Q9JL61 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx5Q9JL61 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.27■□□□□ 0.84
Rfx5Q9JL61 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Rfx5Q9JL61 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.27■□□□□ 0.84
Rfx5Q9JL61 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.27■□□□□ 0.84
Rfx5Q9JL61 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx5Q9JL61 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx5Q9JL61 Iqck-206ENSMUST00000208658 2891 ntBASIC20.27■□□□□ 0.83
Rfx5Q9JL61 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx5Q9JL61 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx5Q9JL61 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx5Q9JL61 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.26■□□□□ 0.83
Rfx5Q9JL61 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rfx5Q9JL61 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Gm42569-201ENSMUST00000200539 472 ntBASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx5Q9JL61 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rfx5Q9JL61 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rfx5Q9JL61 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rfx5Q9JL61 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx5Q9JL61 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.23■□□□□ 0.83
Rfx5Q9JL61 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rfx5Q9JL61 Gm13534-201ENSMUST00000121169 513 ntBASIC20.23■□□□□ 0.83
Rfx5Q9JL61 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx5Q9JL61 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx5Q9JL61 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx5Q9JL61 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.22■□□□□ 0.83
Rfx5Q9JL61 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx5Q9JL61 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx5Q9JL61 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Rfx5Q9JL61 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Rfx5Q9JL61 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.21■□□□□ 0.83
Rfx5Q9JL61 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.21■□□□□ 0.83
Rfx5Q9JL61 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx5Q9JL61 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Rfx5Q9JL61 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms