Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF39Q9H2S5 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC23.67■■□□□ 1.38
RNF39Q9H2S5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.67■■□□□ 1.38
RNF39Q9H2S5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.67■■□□□ 1.38
RNF39Q9H2S5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF39Q9H2S5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF39Q9H2S5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF39Q9H2S5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF39Q9H2S5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF39Q9H2S5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF39Q9H2S5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.66■■□□□ 1.38
RNF39Q9H2S5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF39Q9H2S5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.66■■□□□ 1.38
RNF39Q9H2S5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
RNF39Q9H2S5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF39Q9H2S5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF39Q9H2S5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF39Q9H2S5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
RNF39Q9H2S5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF39Q9H2S5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
RNF39Q9H2S5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF39Q9H2S5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF39Q9H2S5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.65■■□□□ 1.38
RNF39Q9H2S5 AL355816.2-201ENST00000610049 647 ntBASIC23.65■■□□□ 1.38
RNF39Q9H2S5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF39Q9H2S5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.65■■□□□ 1.38
RNF39Q9H2S5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF39Q9H2S5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
RNF39Q9H2S5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.64■■□□□ 1.38
RNF39Q9H2S5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
RNF39Q9H2S5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
RNF39Q9H2S5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RNF39Q9H2S5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
RNF39Q9H2S5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF39Q9H2S5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF39Q9H2S5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.64■■□□□ 1.37
RNF39Q9H2S5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF39Q9H2S5 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC23.64■■□□□ 1.37
RNF39Q9H2S5 EMC4-208ENST00000559078 599 ntTSL 3 BASIC23.64■■□□□ 1.37
RNF39Q9H2S5 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF39Q9H2S5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF39Q9H2S5 AC068313.1-201ENST00000604028 1008 ntBASIC23.64■■□□□ 1.37
RNF39Q9H2S5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF39Q9H2S5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF39Q9H2S5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RNF39Q9H2S5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
RNF39Q9H2S5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 AL137784.2-201ENST00000607332 1000 ntBASIC23.63■■□□□ 1.37
RNF39Q9H2S5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF39Q9H2S5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF39Q9H2S5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
RNF39Q9H2S5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF39Q9H2S5 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC23.62■■□□□ 1.37
RNF39Q9H2S5 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF39Q9H2S5 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC23.62■■□□□ 1.37
RNF39Q9H2S5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF39Q9H2S5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF39Q9H2S5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
RNF39Q9H2S5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
RNF39Q9H2S5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.61■■□□□ 1.37
RNF39Q9H2S5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF39Q9H2S5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF39Q9H2S5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF39Q9H2S5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF39Q9H2S5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.61■■□□□ 1.37
RNF39Q9H2S5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.61■■□□□ 1.37
RNF39Q9H2S5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.61■■□□□ 1.37
RNF39Q9H2S5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.61■■□□□ 1.37
RNF39Q9H2S5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 AC004911.1-201ENST00000416316 871 ntBASIC23.6■■□□□ 1.37
RNF39Q9H2S5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 COA4-204ENST00000541455 1038 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 AC005332.10-201ENST00000612725 619 ntBASIC23.6■■□□□ 1.37
RNF39Q9H2S5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 LINC01960-201ENST00000563759 1884 ntBASIC23.6■■□□□ 1.37
RNF39Q9H2S5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF39Q9H2S5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms