Protein–RNA interactions for Protein: Q9D9M9

Rnf138rt1, RIKEN cDNA 1700045I19, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138rt1Q9D9M9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Rnf138rt1Q9D9M9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf138rt1Q9D9M9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Rnf138rt1Q9D9M9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.18■□□□□ 0.82
Rnf138rt1Q9D9M9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf138rt1Q9D9M9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rnf138rt1Q9D9M9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf138rt1Q9D9M9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf138rt1Q9D9M9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf138rt1Q9D9M9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf138rt1Q9D9M9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.17■□□□□ 0.82
Rnf138rt1Q9D9M9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf138rt1Q9D9M9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf138rt1Q9D9M9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf138rt1Q9D9M9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Rnf138rt1Q9D9M9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf138rt1Q9D9M9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.16■□□□□ 0.82
Rnf138rt1Q9D9M9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf138rt1Q9D9M9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rnf138rt1Q9D9M9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf138rt1Q9D9M9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf138rt1Q9D9M9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Rnf138rt1Q9D9M9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf138rt1Q9D9M9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf138rt1Q9D9M9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf138rt1Q9D9M9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf138rt1Q9D9M9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf138rt1Q9D9M9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf138rt1Q9D9M9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf138rt1Q9D9M9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf138rt1Q9D9M9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rnf138rt1Q9D9M9 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.13■□□□□ 0.81
Rnf138rt1Q9D9M9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf138rt1Q9D9M9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf138rt1Q9D9M9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf138rt1Q9D9M9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138rt1Q9D9M9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
Rnf138rt1Q9D9M9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138rt1Q9D9M9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138rt1Q9D9M9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.12■□□□□ 0.81
Rnf138rt1Q9D9M9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.12■□□□□ 0.81
Rnf138rt1Q9D9M9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138rt1Q9D9M9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138rt1Q9D9M9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138rt1Q9D9M9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rnf138rt1Q9D9M9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf138rt1Q9D9M9 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.12■□□□□ 0.81
Rnf138rt1Q9D9M9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.11■□□□□ 0.81
Rnf138rt1Q9D9M9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf138rt1Q9D9M9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf138rt1Q9D9M9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf138rt1Q9D9M9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf138rt1Q9D9M9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rnf138rt1Q9D9M9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf138rt1Q9D9M9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.1■□□□□ 0.81
Rnf138rt1Q9D9M9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms