Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tubb4aQ9D6F9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tubb4aQ9D6F9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tubb4aQ9D6F9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubb4aQ9D6F9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tubb4aQ9D6F9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.64■□□□□ 0.89
Tubb4aQ9D6F9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubb4aQ9D6F9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubb4aQ9D6F9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tubb4aQ9D6F9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tubb4aQ9D6F9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Tubb4aQ9D6F9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb4aQ9D6F9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb4aQ9D6F9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb4aQ9D6F9 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.63■□□□□ 0.89
Tubb4aQ9D6F9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb4aQ9D6F9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb4aQ9D6F9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tubb4aQ9D6F9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubb4aQ9D6F9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubb4aQ9D6F9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tubb4aQ9D6F9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.62■□□□□ 0.89
Tubb4aQ9D6F9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.62■□□□□ 0.89
Tubb4aQ9D6F9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.62■□□□□ 0.89
Tubb4aQ9D6F9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubb4aQ9D6F9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubb4aQ9D6F9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubb4aQ9D6F9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tubb4aQ9D6F9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubb4aQ9D6F9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tubb4aQ9D6F9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Tubb4aQ9D6F9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubb4aQ9D6F9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Tubb4aQ9D6F9 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.6■□□□□ 0.89
Tubb4aQ9D6F9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tubb4aQ9D6F9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubb4aQ9D6F9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubb4aQ9D6F9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubb4aQ9D6F9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tubb4aQ9D6F9 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.58■□□□□ 0.89
Tubb4aQ9D6F9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.58■□□□□ 0.89
Tubb4aQ9D6F9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tubb4aQ9D6F9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tubb4aQ9D6F9 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.58■□□□□ 0.89
Tubb4aQ9D6F9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tubb4aQ9D6F9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tubb4aQ9D6F9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tubb4aQ9D6F9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tubb4aQ9D6F9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tubb4aQ9D6F9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb4aQ9D6F9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb4aQ9D6F9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tubb4aQ9D6F9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tubb4aQ9D6F9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.57■□□□□ 0.88
Tubb4aQ9D6F9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tubb4aQ9D6F9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms