Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Gtf2ird2Q99NI3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gtf2ird2Q99NI3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 Gm7291-201ENSMUST00000199147 382 ntBASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Gtf2ird2Q99NI3 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.63■□□□□ 0.73
Gtf2ird2Q99NI3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2ird2Q99NI3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2ird2Q99NI3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2ird2Q99NI3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Gtf2ird2Q99NI3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2ird2Q99NI3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2ird2Q99NI3 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.63■□□□□ 0.73
Gtf2ird2Q99NI3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gtf2ird2Q99NI3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.63■□□□□ 0.73
Gtf2ird2Q99NI3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf2ird2Q99NI3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf2ird2Q99NI3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Gtf2ird2Q99NI3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf2ird2Q99NI3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf2ird2Q99NI3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gtf2ird2Q99NI3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Gtf2ird2Q99NI3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf2ird2Q99NI3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf2ird2Q99NI3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf2ird2Q99NI3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf2ird2Q99NI3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.61■□□□□ 0.73
Gtf2ird2Q99NI3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf2ird2Q99NI3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Gtf2ird2Q99NI3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf2ird2Q99NI3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gtf2ird2Q99NI3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.61■□□□□ 0.73
Gtf2ird2Q99NI3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.61■□□□□ 0.73
Gtf2ird2Q99NI3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gtf2ird2Q99NI3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.59■□□□□ 0.73
Gtf2ird2Q99NI3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.59■□□□□ 0.73
Gtf2ird2Q99NI3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf2ird2Q99NI3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Gtf2ird2Q99NI3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Gtf2ird2Q99NI3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.59■□□□□ 0.73
Gtf2ird2Q99NI3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Gtf2ird2Q99NI3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf2ird2Q99NI3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf2ird2Q99NI3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gtf2ird2Q99NI3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.59■□□□□ 0.73
Gtf2ird2Q99NI3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
Gtf2ird2Q99NI3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Gtf2ird2Q99NI3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.58■□□□□ 0.72
Gtf2ird2Q99NI3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Gm13146-201ENSMUST00000118508 780 ntBASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Gm38205-201ENSMUST00000192243 258 ntBASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gtf2ird2Q99NI3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.56■□□□□ 0.72
Gtf2ird2Q99NI3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf2ird2Q99NI3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf2ird2Q99NI3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gtf2ird2Q99NI3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms