Protein–RNA interactions for Protein: Q91YK2

Rrp1b, Ribosomal RNA processing protein 1 homolog B, mousemouse

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1bQ91YK2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rrp1bQ91YK2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rrp1bQ91YK2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rrp1bQ91YK2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rrp1bQ91YK2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Gm9870-201ENSMUST00000063874 645 ntBASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rrp1bQ91YK2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rrp1bQ91YK2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rrp1bQ91YK2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rrp1bQ91YK2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rrp1bQ91YK2 Etf1-202ENSMUST00000180351 108 ntBASIC20.29■□□□□ 0.84
Rrp1bQ91YK2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.29■□□□□ 0.84
Rrp1bQ91YK2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rrp1bQ91YK2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rrp1bQ91YK2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rrp1bQ91YK2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
Rrp1bQ91YK2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rrp1bQ91YK2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.27■□□□□ 0.84
Rrp1bQ91YK2 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.27■□□□□ 0.84
Rrp1bQ91YK2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rrp1bQ91YK2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rrp1bQ91YK2 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.27■□□□□ 0.84
Rrp1bQ91YK2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rrp1bQ91YK2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rrp1bQ91YK2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp1bQ91YK2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp1bQ91YK2 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.26■□□□□ 0.83
Rrp1bQ91YK2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.26■□□□□ 0.83
Rrp1bQ91YK2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp1bQ91YK2 Gm5921-201ENSMUST00000075898 882 ntBASIC20.26■□□□□ 0.83
Rrp1bQ91YK2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.26■□□□□ 0.83
Rrp1bQ91YK2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp1bQ91YK2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp1bQ91YK2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp1bQ91YK2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp1bQ91YK2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rrp1bQ91YK2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rrp1bQ91YK2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rrp1bQ91YK2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rrp1bQ91YK2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.25■□□□□ 0.83
Rrp1bQ91YK2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rrp1bQ91YK2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.25■□□□□ 0.83
Rrp1bQ91YK2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.24■□□□□ 0.83
Rrp1bQ91YK2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp1bQ91YK2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp1bQ91YK2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp1bQ91YK2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rrp1bQ91YK2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rrp1bQ91YK2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp1bQ91YK2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp1bQ91YK2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp1bQ91YK2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp1bQ91YK2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rrp1bQ91YK2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rrp1bQ91YK2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rrp1bQ91YK2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rrp1bQ91YK2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rrp1bQ91YK2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms