Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb13Q91Y06 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb13Q91Y06 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb13Q91Y06 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb13Q91Y06 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.24■□□□□ 0.67
Pcdhb13Q91Y06 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb13Q91Y06 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb13Q91Y06 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb13Q91Y06 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb13Q91Y06 Golph3-205ENSMUST00000228671 2842 ntBASIC19.21■□□□□ 0.67
Pcdhb13Q91Y06 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb13Q91Y06 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb13Q91Y06 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
Pcdhb13Q91Y06 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhb13Q91Y06 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb13Q91Y06 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb13Q91Y06 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb13Q91Y06 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb13Q91Y06 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.21■□□□□ 0.66
Pcdhb13Q91Y06 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 Gm43017-201ENSMUST00000198296 752 ntBASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb13Q91Y06 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb13Q91Y06 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdhb13Q91Y06 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb13Q91Y06 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb13Q91Y06 Gm26833-201ENSMUST00000180899 440 ntBASIC19.19■□□□□ 0.66
Pcdhb13Q91Y06 Gm27801-201ENSMUST00000184174 223 ntBASIC19.19■□□□□ 0.66
Pcdhb13Q91Y06 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb13Q91Y06 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdhb13Q91Y06 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Pcdhb13Q91Y06 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb13Q91Y06 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb13Q91Y06 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb13Q91Y06 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb13Q91Y06 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb13Q91Y06 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb13Q91Y06 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhb13Q91Y06 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhb13Q91Y06 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb13Q91Y06 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb13Q91Y06 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb13Q91Y06 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb13Q91Y06 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms