Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.22■□□□□ 0.83
Pcdhgb4Q91XX6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb4Q91XX6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb4Q91XX6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb4Q91XX6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Pcdhgb4Q91XX6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb4Q91XX6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhgb4Q91XX6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Smad6-203ENSMUST00000179458 273 ntBASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhgb4Q91XX6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Pcdhgb4Q91XX6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb4Q91XX6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb4Q91XX6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhgb4Q91XX6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb4Q91XX6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb4Q91XX6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb4Q91XX6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb4Q91XX6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdhgb4Q91XX6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
Pcdhgb4Q91XX6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb4Q91XX6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhgb4Q91XX6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhgb4Q91XX6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Gm6139-201ENSMUST00000079261 882 ntBASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgb4Q91XX6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb4Q91XX6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb4Q91XX6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb4Q91XX6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb4Q91XX6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb4Q91XX6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb4Q91XX6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb4Q91XX6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.17■□□□□ 0.82
Pcdhgb4Q91XX6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdhgb4Q91XX6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgb4Q91XX6 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.17■□□□□ 0.82
Pcdhgb4Q91XX6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdhgb4Q91XX6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb4Q91XX6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb4Q91XX6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb4Q91XX6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb4Q91XX6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Pcdhgb4Q91XX6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhgb4Q91XX6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb4Q91XX6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb4Q91XX6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb4Q91XX6 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.16■□□□□ 0.82
Pcdhgb4Q91XX6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb4Q91XX6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb4Q91XX6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb4Q91XX6 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.15■□□□□ 0.82
Pcdhgb4Q91XX6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb4Q91XX6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Pcdhgb4Q91XX6 Gm11421-201ENSMUST00000122124 294 ntBASIC20.15■□□□□ 0.82
Pcdhgb4Q91XX6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb4Q91XX6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Pcdhgb4Q91XX6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
Pcdhgb4Q91XX6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb4Q91XX6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.15■□□□□ 0.82
Pcdhgb4Q91XX6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms