Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc6a20aQ8VDB9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Gm6139-201ENSMUST00000079261 882 ntBASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a20aQ8VDB9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20aQ8VDB9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20aQ8VDB9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20aQ8VDB9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20aQ8VDB9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20aQ8VDB9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20aQ8VDB9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a20aQ8VDB9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.84■□□□□ 0.61
Slc6a20aQ8VDB9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a20aQ8VDB9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a20aQ8VDB9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a20aQ8VDB9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Slc6a20aQ8VDB9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a20aQ8VDB9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a20aQ8VDB9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a20aQ8VDB9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.83■□□□□ 0.6
Slc6a20aQ8VDB9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a20aQ8VDB9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a20aQ8VDB9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Slc6a20aQ8VDB9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a20aQ8VDB9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a20aQ8VDB9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20aQ8VDB9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20aQ8VDB9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20aQ8VDB9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20aQ8VDB9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Slc6a20aQ8VDB9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20aQ8VDB9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Slc6a20aQ8VDB9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Slc6a20aQ8VDB9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20aQ8VDB9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20aQ8VDB9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a20aQ8VDB9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a20aQ8VDB9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a20aQ8VDB9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.81■□□□□ 0.6
Slc6a20aQ8VDB9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a20aQ8VDB9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a20aQ8VDB9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Slc6a20aQ8VDB9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a20aQ8VDB9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Slc6a20aQ8VDB9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Slc6a20aQ8VDB9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a20aQ8VDB9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a20aQ8VDB9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Slc6a20aQ8VDB9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a20aQ8VDB9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a20aQ8VDB9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a20aQ8VDB9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.8■□□□□ 0.6
Slc6a20aQ8VDB9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a20aQ8VDB9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a20aQ8VDB9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a20aQ8VDB9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Slc6a20aQ8VDB9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a20aQ8VDB9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a20aQ8VDB9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms