Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Vps39Q8R5L3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps39Q8R5L3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps39Q8R5L3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps39Q8R5L3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vps39Q8R5L3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.1■□□□□ 0.65
Vps39Q8R5L3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vps39Q8R5L3 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.1■□□□□ 0.65
Vps39Q8R5L3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vps39Q8R5L3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.08■□□□□ 0.65
Vps39Q8R5L3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vps39Q8R5L3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Vps39Q8R5L3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vps39Q8R5L3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Vps39Q8R5L3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Vps39Q8R5L3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps39Q8R5L3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps39Q8R5L3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vps39Q8R5L3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vps39Q8R5L3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vps39Q8R5L3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vps39Q8R5L3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Gm21956-201ENSMUST00000179946 522 ntBASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vps39Q8R5L3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vps39Q8R5L3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps39Q8R5L3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps39Q8R5L3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vps39Q8R5L3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms