Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.77■□□□□ 0.6
Chrna3Q8R4G9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.77■□□□□ 0.6
Chrna3Q8R4G9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna3Q8R4G9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna3Q8R4G9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna3Q8R4G9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.77■□□□□ 0.6
Chrna3Q8R4G9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Chrna3Q8R4G9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chrna3Q8R4G9 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.77■□□□□ 0.59
Chrna3Q8R4G9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chrna3Q8R4G9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chrna3Q8R4G9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna3Q8R4G9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.74■□□□□ 0.59
Chrna3Q8R4G9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna3Q8R4G9 Gm38205-201ENSMUST00000192243 258 ntBASIC18.74■□□□□ 0.59
Chrna3Q8R4G9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna3Q8R4G9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chrna3Q8R4G9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.73■□□□□ 0.59
Chrna3Q8R4G9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.73■□□□□ 0.59
Chrna3Q8R4G9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Chrna3Q8R4G9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna3Q8R4G9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna3Q8R4G9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna3Q8R4G9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chrna3Q8R4G9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna3Q8R4G9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.73■□□□□ 0.59
Chrna3Q8R4G9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.73■□□□□ 0.59
Chrna3Q8R4G9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.73■□□□□ 0.59
Chrna3Q8R4G9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chrna3Q8R4G9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chrna3Q8R4G9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Chrna3Q8R4G9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna3Q8R4G9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.72■□□□□ 0.59
Chrna3Q8R4G9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna3Q8R4G9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna3Q8R4G9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Chrna3Q8R4G9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna3Q8R4G9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna3Q8R4G9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chrna3Q8R4G9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.72■□□□□ 0.59
Chrna3Q8R4G9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna3Q8R4G9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna3Q8R4G9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Chrna3Q8R4G9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Chrna3Q8R4G9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna3Q8R4G9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.71■□□□□ 0.59
Chrna3Q8R4G9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Chrna3Q8R4G9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chrna3Q8R4G9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Chrna3Q8R4G9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna3Q8R4G9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna3Q8R4G9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna3Q8R4G9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna3Q8R4G9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Chrna3Q8R4G9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.7■□□□□ 0.58
Chrna3Q8R4G9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.7■□□□□ 0.58
Chrna3Q8R4G9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.7■□□□□ 0.58
Chrna3Q8R4G9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chrna3Q8R4G9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Chrna3Q8R4G9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Gm13146-201ENSMUST00000118508 780 ntBASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Gm7860-201ENSMUST00000121190 879 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms