Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTL9Q8NET4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTL9Q8NET4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTL9Q8NET4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTL9Q8NET4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTL9Q8NET4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTL9Q8NET4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.77■■□□□ 1.88
RTL9Q8NET4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RTL9Q8NET4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.76■■□□□ 1.87
RTL9Q8NET4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.76■■□□□ 1.87
RTL9Q8NET4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC26.76■■□□□ 1.87
RTL9Q8NET4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC26.76■■□□□ 1.87
RTL9Q8NET4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RTL9Q8NET4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RTL9Q8NET4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
RTL9Q8NET4 LINC00526-201ENST00000581067 1875 ntBASIC26.76■■□□□ 1.87
RTL9Q8NET4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RTL9Q8NET4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RTL9Q8NET4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RTL9Q8NET4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
RTL9Q8NET4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RTL9Q8NET4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTL9Q8NET4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTL9Q8NET4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTL9Q8NET4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTL9Q8NET4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC26.75■■□□□ 1.87
RTL9Q8NET4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.75■■□□□ 1.87
RTL9Q8NET4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RTL9Q8NET4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTL9Q8NET4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RTL9Q8NET4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC26.74■■□□□ 1.87
RTL9Q8NET4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.74■■□□□ 1.87
RTL9Q8NET4 MFSD11-216ENST00000590393 1141 ntBASIC26.74■■□□□ 1.87
RTL9Q8NET4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.74■■□□□ 1.87
RTL9Q8NET4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC26.74■■□□□ 1.87
RTL9Q8NET4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
RTL9Q8NET4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTL9Q8NET4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTL9Q8NET4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTL9Q8NET4 ABHD17AP1-201ENST00000358206 933 ntBASIC26.73■■□□□ 1.87
RTL9Q8NET4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26.73■■□□□ 1.87
RTL9Q8NET4 AL034346.1-201ENST00000568244 1277 ntBASIC26.73■■□□□ 1.87
RTL9Q8NET4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.73■■□□□ 1.87
RTL9Q8NET4 OR7E47P-201ENST00000546390 1422 ntBASIC26.73■■□□□ 1.87
RTL9Q8NET4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RTL9Q8NET4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RTL9Q8NET4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RTL9Q8NET4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RTL9Q8NET4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.72■■□□□ 1.87
RTL9Q8NET4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC26.72■■□□□ 1.87
RTL9Q8NET4 AC011767.1-201ENST00000617410 1153 ntBASIC26.72■■□□□ 1.87
RTL9Q8NET4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
RTL9Q8NET4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL9Q8NET4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL9Q8NET4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL9Q8NET4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.72■■□□□ 1.87
RTL9Q8NET4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RTL9Q8NET4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL9Q8NET4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RTL9Q8NET4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
RTL9Q8NET4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL9Q8NET4 AP004607.7-201ENST00000527152 1677 ntBASIC26.72■■□□□ 1.87
RTL9Q8NET4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RTL9Q8NET4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTL9Q8NET4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.71■■□□□ 1.87
RTL9Q8NET4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RTL9Q8NET4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
RTL9Q8NET4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTL9Q8NET4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
RTL9Q8NET4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTL9Q8NET4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTL9Q8NET4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RTL9Q8NET4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.71■■□□□ 1.87
RTL9Q8NET4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RTL9Q8NET4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RTL9Q8NET4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.7■■□□□ 1.86
RTL9Q8NET4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.7■■□□□ 1.86
RTL9Q8NET4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RTL9Q8NET4 AL355802.2-201ENST00000402069 882 ntBASIC26.7■■□□□ 1.86
RTL9Q8NET4 AC006970.2-201ENST00000450065 779 ntBASIC26.7■■□□□ 1.86
RTL9Q8NET4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
RTL9Q8NET4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
RTL9Q8NET4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC26.7■■□□□ 1.86
RTL9Q8NET4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
RTL9Q8NET4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
RTL9Q8NET4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RTL9Q8NET4 AC087742.1-201ENST00000575880 1738 ntBASIC26.69■■□□□ 1.86
RTL9Q8NET4 NCF1B-203ENST00000435988 1254 ntBASIC26.69■■□□□ 1.86
RTL9Q8NET4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC26.69■■□□□ 1.86
RTL9Q8NET4 AL109923.1-201ENST00000618799 583 ntBASIC26.69■■□□□ 1.86
RTL9Q8NET4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RTL9Q8NET4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RTL9Q8NET4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RTL9Q8NET4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
RTL9Q8NET4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.68■■□□□ 1.86
RTL9Q8NET4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RTL9Q8NET4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RTL9Q8NET4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.68■■□□□ 1.86
RTL9Q8NET4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.68■■□□□ 1.86
RTL9Q8NET4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms