Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lysmd4Q8CC84 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Lysmd4Q8CC84 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lysmd4Q8CC84 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lysmd4Q8CC84 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lysmd4Q8CC84 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lysmd4Q8CC84 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lysmd4Q8CC84 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lysmd4Q8CC84 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lysmd4Q8CC84 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lysmd4Q8CC84 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Lysmd4Q8CC84 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lysmd4Q8CC84 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lysmd4Q8CC84 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Lysmd4Q8CC84 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lysmd4Q8CC84 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lysmd4Q8CC84 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lysmd4Q8CC84 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lysmd4Q8CC84 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lysmd4Q8CC84 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lysmd4Q8CC84 Gm5812-201ENSMUST00000061073 957 ntBASIC17.14■□□□□ 0.33
Lysmd4Q8CC84 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lysmd4Q8CC84 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lysmd4Q8CC84 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Lysmd4Q8CC84 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lysmd4Q8CC84 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Gm7417-201ENSMUST00000192950 473 ntBASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lysmd4Q8CC84 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Gm15546-201ENSMUST00000122095 826 ntBASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lysmd4Q8CC84 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lysmd4Q8CC84 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd4Q8CC84 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lysmd4Q8CC84 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd4Q8CC84 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd4Q8CC84 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd4Q8CC84 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd4Q8CC84 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lysmd4Q8CC84 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms