Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne3Q8BT60 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne3Q8BT60 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpne3Q8BT60 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.39■□□□□ 0.54
Cpne3Q8BT60 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cpne3Q8BT60 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne3Q8BT60 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.39■□□□□ 0.53
Cpne3Q8BT60 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne3Q8BT60 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.39■□□□□ 0.53
Cpne3Q8BT60 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne3Q8BT60 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.39■□□□□ 0.53
Cpne3Q8BT60 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne3Q8BT60 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne3Q8BT60 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne3Q8BT60 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne3Q8BT60 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne3Q8BT60 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cpne3Q8BT60 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpne3Q8BT60 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne3Q8BT60 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne3Q8BT60 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne3Q8BT60 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne3Q8BT60 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.38■□□□□ 0.53
Cpne3Q8BT60 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne3Q8BT60 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cpne3Q8BT60 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne3Q8BT60 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.38■□□□□ 0.53
Cpne3Q8BT60 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne3Q8BT60 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpne3Q8BT60 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cpne3Q8BT60 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne3Q8BT60 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne3Q8BT60 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne3Q8BT60 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cpne3Q8BT60 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cpne3Q8BT60 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne3Q8BT60 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne3Q8BT60 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne3Q8BT60 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.37■□□□□ 0.53
Cpne3Q8BT60 Gm43137-201ENSMUST00000198052 594 ntBASIC18.37■□□□□ 0.53
Cpne3Q8BT60 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpne3Q8BT60 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne3Q8BT60 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne3Q8BT60 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne3Q8BT60 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.36■□□□□ 0.53
Cpne3Q8BT60 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne3Q8BT60 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne3Q8BT60 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.36■□□□□ 0.53
Cpne3Q8BT60 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne3Q8BT60 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpne3Q8BT60 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpne3Q8BT60 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne3Q8BT60 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne3Q8BT60 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne3Q8BT60 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne3Q8BT60 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cpne3Q8BT60 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.34■□□□□ 0.53
Cpne3Q8BT60 Serp2-204ENSMUST00000228055 705 ntBASIC18.34■□□□□ 0.53
Cpne3Q8BT60 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne3Q8BT60 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne3Q8BT60 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne3Q8BT60 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpne3Q8BT60 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cpne3Q8BT60 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpne3Q8BT60 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpne3Q8BT60 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne3Q8BT60 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpne3Q8BT60 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms