Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4Q8BQZ5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4Q8BQZ5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpsf4Q8BQZ5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpsf4Q8BQZ5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpsf4Q8BQZ5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf4Q8BQZ5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cpsf4Q8BQZ5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf4Q8BQZ5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf4Q8BQZ5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Cpsf4Q8BQZ5 Smad6-203ENSMUST00000179458 273 ntBASIC18.48■□□□□ 0.55
Cpsf4Q8BQZ5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.48■□□□□ 0.55
Cpsf4Q8BQZ5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf4Q8BQZ5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cpsf4Q8BQZ5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf4Q8BQZ5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf4Q8BQZ5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpsf4Q8BQZ5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpsf4Q8BQZ5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Gm26833-201ENSMUST00000180899 440 ntBASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpsf4Q8BQZ5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cpsf4Q8BQZ5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Gm40848-201ENSMUST00000221998 324 ntBASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpsf4Q8BQZ5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms