Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Depdc1bQ8BH88 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Depdc1bQ8BH88 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Depdc1bQ8BH88 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Depdc1bQ8BH88 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Depdc1bQ8BH88 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Depdc1bQ8BH88 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.72■□□□□ 0.91
Depdc1bQ8BH88 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Depdc1bQ8BH88 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Depdc1bQ8BH88 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Depdc1bQ8BH88 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.72■□□□□ 0.91
Depdc1bQ8BH88 Gm40848-201ENSMUST00000221998 324 ntBASIC20.72■□□□□ 0.91
Depdc1bQ8BH88 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Depdc1bQ8BH88 Gm10493-201ENSMUST00000097270 612 ntBASIC20.72■□□□□ 0.91
Depdc1bQ8BH88 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Depdc1bQ8BH88 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Depdc1bQ8BH88 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Depdc1bQ8BH88 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Depdc1bQ8BH88 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Depdc1bQ8BH88 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Depdc1bQ8BH88 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Depdc1bQ8BH88 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.71■□□□□ 0.91
Depdc1bQ8BH88 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.71■□□□□ 0.91
Depdc1bQ8BH88 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Depdc1bQ8BH88 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Depdc1bQ8BH88 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Depdc1bQ8BH88 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Depdc1bQ8BH88 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Depdc1bQ8BH88 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Depdc1bQ8BH88 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Depdc1bQ8BH88 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Depdc1bQ8BH88 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Depdc1bQ8BH88 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Depdc1bQ8BH88 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Depdc1bQ8BH88 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Depdc1bQ8BH88 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.7■□□□□ 0.9
Depdc1bQ8BH88 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Depdc1bQ8BH88 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Depdc1bQ8BH88 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.68■□□□□ 0.9
Depdc1bQ8BH88 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Depdc1bQ8BH88 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Depdc1bQ8BH88 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Depdc1bQ8BH88 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.68■□□□□ 0.9
Depdc1bQ8BH88 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Depdc1bQ8BH88 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Depdc1bQ8BH88 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Depdc1bQ8BH88 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Depdc1bQ8BH88 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Depdc1bQ8BH88 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Depdc1bQ8BH88 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Depdc1bQ8BH88 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Depdc1bQ8BH88 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Depdc1bQ8BH88 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Depdc1bQ8BH88 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Depdc1bQ8BH88 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Depdc1bQ8BH88 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Depdc1bQ8BH88 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Depdc1bQ8BH88 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Depdc1bQ8BH88 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Depdc1bQ8BH88 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.64■□□□□ 0.89
Depdc1bQ8BH88 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Depdc1bQ8BH88 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms