Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn4bQ7M729 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn4bQ7M729 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn4bQ7M729 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn4bQ7M729 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn4bQ7M729 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scn4bQ7M729 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn4bQ7M729 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.58■□□□□ 0.56
Scn4bQ7M729 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn4bQ7M729 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn4bQ7M729 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Scn4bQ7M729 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn4bQ7M729 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn4bQ7M729 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn4bQ7M729 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Scn4bQ7M729 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn4bQ7M729 Gm26833-201ENSMUST00000180899 440 ntBASIC18.57■□□□□ 0.56
Scn4bQ7M729 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn4bQ7M729 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.57■□□□□ 0.56
Scn4bQ7M729 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn4bQ7M729 Gm40848-201ENSMUST00000221998 324 ntBASIC18.57■□□□□ 0.56
Scn4bQ7M729 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn4bQ7M729 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn4bQ7M729 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn4bQ7M729 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn4bQ7M729 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn4bQ7M729 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn4bQ7M729 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn4bQ7M729 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4bQ7M729 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4bQ7M729 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4bQ7M729 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.56■□□□□ 0.56
Scn4bQ7M729 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.56■□□□□ 0.56
Scn4bQ7M729 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4bQ7M729 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Scn4bQ7M729 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4bQ7M729 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4bQ7M729 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4bQ7M729 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4bQ7M729 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn4bQ7M729 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4bQ7M729 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4bQ7M729 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4bQ7M729 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4bQ7M729 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Scn4bQ7M729 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4bQ7M729 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4bQ7M729 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Scn4bQ7M729 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.55■□□□□ 0.56
Scn4bQ7M729 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Scn4bQ7M729 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4bQ7M729 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4bQ7M729 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn4bQ7M729 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4bQ7M729 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Scn4bQ7M729 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Scn4bQ7M729 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4bQ7M729 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4bQ7M729 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4bQ7M729 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Scn4bQ7M729 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4bQ7M729 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Scn4bQ7M729 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4bQ7M729 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4bQ7M729 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Scn4bQ7M729 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn4bQ7M729 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.54■□□□□ 0.56
Scn4bQ7M729 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.54■□□□□ 0.56
Scn4bQ7M729 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4bQ7M729 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn4bQ7M729 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Scn4bQ7M729 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn4bQ7M729 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn4bQ7M729 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn4bQ7M729 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn4bQ7M729 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn4bQ7M729 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.52■□□□□ 0.56
Scn4bQ7M729 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Scn4bQ7M729 Gm27801-201ENSMUST00000184174 223 ntBASIC18.52■□□□□ 0.56
Scn4bQ7M729 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn4bQ7M729 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn4bQ7M729 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Scn4bQ7M729 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn4bQ7M729 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Scn4bQ7M729 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn4bQ7M729 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn4bQ7M729 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms