Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.09■□□□□ 0.81
Lsm8Q6ZWM4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.09■□□□□ 0.81
Lsm8Q6ZWM4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm8Q6ZWM4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm8Q6ZWM4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm8Q6ZWM4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm8Q6ZWM4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm8Q6ZWM4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm8Q6ZWM4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.09■□□□□ 0.81
Lsm8Q6ZWM4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lsm8Q6ZWM4 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.09■□□□□ 0.81
Lsm8Q6ZWM4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm8Q6ZWM4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Lsm8Q6ZWM4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.08■□□□□ 0.81
Lsm8Q6ZWM4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm8Q6ZWM4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm8Q6ZWM4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lsm8Q6ZWM4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lsm8Q6ZWM4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lsm8Q6ZWM4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lsm8Q6ZWM4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lsm8Q6ZWM4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lsm8Q6ZWM4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.08■□□□□ 0.8
Lsm8Q6ZWM4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lsm8Q6ZWM4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lsm8Q6ZWM4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lsm8Q6ZWM4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Lsm8Q6ZWM4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lsm8Q6ZWM4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Iqck-206ENSMUST00000208658 2891 ntBASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lsm8Q6ZWM4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm8Q6ZWM4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm8Q6ZWM4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm8Q6ZWM4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lsm8Q6ZWM4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms