Protein–RNA interactions for Protein: Q64336

Tbr1, T-box brain protein 1, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbr1Q64336 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tbr1Q64336 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tbr1Q64336 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tbr1Q64336 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.27■□□□□ 0.36
Tbr1Q64336 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tbr1Q64336 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tbr1Q64336 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tbr1Q64336 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tbr1Q64336 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tbr1Q64336 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tbr1Q64336 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Tbr1Q64336 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tbr1Q64336 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.26■□□□□ 0.35
Tbr1Q64336 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tbr1Q64336 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tbr1Q64336 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tbr1Q64336 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tbr1Q64336 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.26■□□□□ 0.35
Tbr1Q64336 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tbr1Q64336 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tbr1Q64336 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Tbr1Q64336 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tbr1Q64336 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Tbr1Q64336 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tbr1Q64336 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Tbr1Q64336 Gm18666-201ENSMUST00000190039 958 ntBASIC17.25■□□□□ 0.35
Tbr1Q64336 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.25■□□□□ 0.35
Tbr1Q64336 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tbr1Q64336 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tbr1Q64336 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Tbr1Q64336 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tbr1Q64336 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tbr1Q64336 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tbr1Q64336 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tbr1Q64336 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tbr1Q64336 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tbr1Q64336 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tbr1Q64336 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tbr1Q64336 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tbr1Q64336 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.23■□□□□ 0.35
Tbr1Q64336 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tbr1Q64336 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tbr1Q64336 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tbr1Q64336 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tbr1Q64336 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tbr1Q64336 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tbr1Q64336 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tbr1Q64336 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Tbr1Q64336 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tbr1Q64336 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.22■□□□□ 0.35
Tbr1Q64336 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tbr1Q64336 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Tbr1Q64336 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tbr1Q64336 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tbr1Q64336 Gm11249-201ENSMUST00000117071 859 ntBASIC17.22■□□□□ 0.35
Tbr1Q64336 Gm11643-201ENSMUST00000119578 864 ntBASIC17.22■□□□□ 0.35
Tbr1Q64336 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tbr1Q64336 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.22■□□□□ 0.35
Tbr1Q64336 Gm10698-201ENSMUST00000182663 604 ntBASIC17.22■□□□□ 0.35
Tbr1Q64336 Gm37055-201ENSMUST00000191866 133 ntBASIC17.22■□□□□ 0.35
Tbr1Q64336 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Tbr1Q64336 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.22■□□□□ 0.35
Tbr1Q64336 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tbr1Q64336 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.22■□□□□ 0.35
Tbr1Q64336 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Tbr1Q64336 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tbr1Q64336 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tbr1Q64336 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tbr1Q64336 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.21■□□□□ 0.35
Tbr1Q64336 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tbr1Q64336 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tbr1Q64336 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.21■□□□□ 0.35
Tbr1Q64336 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tbr1Q64336 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tbr1Q64336 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tbr1Q64336 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.21■□□□□ 0.34
Tbr1Q64336 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Tbr1Q64336 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.2■□□□□ 0.34
Tbr1Q64336 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.2■□□□□ 0.34
Tbr1Q64336 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tbr1Q64336 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tbr1Q64336 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tbr1Q64336 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tbr1Q64336 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Tbr1Q64336 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tbr1Q64336 Gm15378-201ENSMUST00000121894 207 ntBASIC17.19■□□□□ 0.34
Tbr1Q64336 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tbr1Q64336 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms