Protein–RNA interactions for Protein: Q62249

Sox19, Protein SOX-19 (Fragment), mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox19Q62249 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sox19Q62249 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Sox19Q62249 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Sox19Q62249 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Sox19Q62249 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox19Q62249 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox19Q62249 Gm13238-201ENSMUST00000117655 780 ntBASIC16.33■□□□□ 0.2
Sox19Q62249 Etf1-202ENSMUST00000180351 108 ntBASIC16.33■□□□□ 0.2
Sox19Q62249 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sox19Q62249 Gm9870-201ENSMUST00000063874 645 ntBASIC16.33■□□□□ 0.2
Sox19Q62249 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sox19Q62249 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Sox19Q62249 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sox19Q62249 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sox19Q62249 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox19Q62249 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
Sox19Q62249 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox19Q62249 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox19Q62249 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.32■□□□□ 0.2
Sox19Q62249 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox19Q62249 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox19Q62249 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox19Q62249 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox19Q62249 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox19Q62249 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox19Q62249 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sox19Q62249 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sox19Q62249 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.31■□□□□ 0.2
Sox19Q62249 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.31■□□□□ 0.2
Sox19Q62249 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.31■□□□□ 0.2
Sox19Q62249 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Gm5921-201ENSMUST00000075898 882 ntBASIC16.31■□□□□ 0.2
Sox19Q62249 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sox19Q62249 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sox19Q62249 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox19Q62249 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.3■□□□□ 0.2
Sox19Q62249 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox19Q62249 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.3■□□□□ 0.2
Sox19Q62249 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sox19Q62249 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox19Q62249 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sox19Q62249 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Sox19Q62249 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox19Q62249 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sox19Q62249 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.3■□□□□ 0.2
Sox19Q62249 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox19Q62249 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox19Q62249 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox19Q62249 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox19Q62249 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox19Q62249 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox19Q62249 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox19Q62249 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Sox19Q62249 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Sox19Q62249 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Sox19Q62249 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Sox19Q62249 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.29■□□□□ 0.2
Sox19Q62249 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.29■□□□□ 0.2
Sox19Q62249 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.29■□□□□ 0.2
Sox19Q62249 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.29■□□□□ 0.2
Sox19Q62249 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sox19Q62249 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Sox19Q62249 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox19Q62249 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox19Q62249 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox19Q62249 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox19Q62249 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Sox19Q62249 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox19Q62249 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox19Q62249 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox19Q62249 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms