Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itm2aQ61500 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itm2aQ61500 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itm2aQ61500 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itm2aQ61500 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itm2aQ61500 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itm2aQ61500 Gm7417-201ENSMUST00000192950 473 ntBASIC18.82■□□□□ 0.6
Itm2aQ61500 Gm15820-201ENSMUST00000201566 728 ntBASIC18.82■□□□□ 0.6
Itm2aQ61500 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itm2aQ61500 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.82■□□□□ 0.6
Itm2aQ61500 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itm2aQ61500 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itm2aQ61500 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Itm2aQ61500 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Itm2aQ61500 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itm2aQ61500 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Itm2aQ61500 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itm2aQ61500 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itm2aQ61500 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itm2aQ61500 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.81■□□□□ 0.6
Itm2aQ61500 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itm2aQ61500 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itm2aQ61500 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itm2aQ61500 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itm2aQ61500 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itm2aQ61500 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itm2aQ61500 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itm2aQ61500 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Itm2aQ61500 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itm2aQ61500 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itm2aQ61500 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Itm2aQ61500 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itm2aQ61500 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itm2aQ61500 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Itm2aQ61500 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itm2aQ61500 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itm2aQ61500 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itm2aQ61500 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itm2aQ61500 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itm2aQ61500 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itm2aQ61500 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itm2aQ61500 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itm2aQ61500 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Itm2aQ61500 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Itm2aQ61500 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itm2aQ61500 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itm2aQ61500 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itm2aQ61500 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itm2aQ61500 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itm2aQ61500 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itm2aQ61500 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Itm2aQ61500 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Itm2aQ61500 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itm2aQ61500 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itm2aQ61500 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.78■□□□□ 0.6
Itm2aQ61500 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Itm2aQ61500 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Itm2aQ61500 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itm2aQ61500 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.78■□□□□ 0.6
Itm2aQ61500 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itm2aQ61500 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itm2aQ61500 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itm2aQ61500 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itm2aQ61500 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Itm2aQ61500 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itm2aQ61500 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Itm2aQ61500 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itm2aQ61500 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Itm2aQ61500 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Itm2aQ61500 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Itm2aQ61500 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Itm2aQ61500 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itm2aQ61500 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itm2aQ61500 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Itm2aQ61500 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itm2aQ61500 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itm2aQ61500 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Itm2aQ61500 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itm2aQ61500 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itm2aQ61500 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itm2aQ61500 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itm2aQ61500 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Itm2aQ61500 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.75■□□□□ 0.59
Itm2aQ61500 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Itm2aQ61500 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.75■□□□□ 0.59
Itm2aQ61500 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Itm2aQ61500 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Itm2aQ61500 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.75■□□□□ 0.59
Itm2aQ61500 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Itm2aQ61500 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Itm2aQ61500 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Itm2aQ61500 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Itm2aQ61500 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Itm2aQ61500 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Itm2aQ61500 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.74■□□□□ 0.59
Itm2aQ61500 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Itm2aQ61500 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Itm2aQ61500 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.74■□□□□ 0.59
Itm2aQ61500 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.74■□□□□ 0.59
Itm2aQ61500 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms