Protein–RNA interactions for Protein: Q61456

Ccna1, Cyclin-A1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccna1Q61456 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.36■■□□□ 1.01
Ccna1Q61456 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccna1Q61456 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccna1Q61456 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ccna1Q61456 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccna1Q61456 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccna1Q61456 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Ccna1Q61456 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccna1Q61456 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ccna1Q61456 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccna1Q61456 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccna1Q61456 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.35■■□□□ 1.01
Ccna1Q61456 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccna1Q61456 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccna1Q61456 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.35■■□□□ 1.01
Ccna1Q61456 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccna1Q61456 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccna1Q61456 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccna1Q61456 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccna1Q61456 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.34■■□□□ 1.01
Ccna1Q61456 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccna1Q61456 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccna1Q61456 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.34■■□□□ 1.01
Ccna1Q61456 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccna1Q61456 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccna1Q61456 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccna1Q61456 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ccna1Q61456 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ccna1Q61456 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.33■■□□□ 1.01
Ccna1Q61456 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ccna1Q61456 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ccna1Q61456 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.33■■□□□ 1.01
Ccna1Q61456 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.33■■□□□ 1.01
Ccna1Q61456 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Ccna1Q61456 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccna1Q61456 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.33■■□□□ 1
Ccna1Q61456 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccna1Q61456 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccna1Q61456 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Ccna1Q61456 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Ccna1Q61456 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Ccna1Q61456 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccna1Q61456 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccna1Q61456 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccna1Q61456 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccna1Q61456 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccna1Q61456 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.32■■□□□ 1
Ccna1Q61456 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ccna1Q61456 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ccna1Q61456 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Ccna1Q61456 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccna1Q61456 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.32■■□□□ 1
Ccna1Q61456 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ccna1Q61456 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccna1Q61456 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccna1Q61456 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.31■■□□□ 1
Ccna1Q61456 Gm38205-201ENSMUST00000192243 258 ntBASIC21.31■■□□□ 1
Ccna1Q61456 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.31■■□□□ 1
Ccna1Q61456 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccna1Q61456 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccna1Q61456 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccna1Q61456 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccna1Q61456 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccna1Q61456 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccna1Q61456 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccna1Q61456 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccna1Q61456 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccna1Q61456 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Ccna1Q61456 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.3■■□□□ 1
Ccna1Q61456 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccna1Q61456 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.3■■□□□ 1
Ccna1Q61456 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccna1Q61456 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccna1Q61456 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Ccna1Q61456 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccna1Q61456 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccna1Q61456 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccna1Q61456 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ccna1Q61456 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccna1Q61456 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccna1Q61456 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ccna1Q61456 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.29■■□□□ 1
Ccna1Q61456 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.29■■□□□ 1
Ccna1Q61456 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Ccna1Q61456 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.29■■□□□ 1
Ccna1Q61456 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ccna1Q61456 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccna1Q61456 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ccna1Q61456 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.29■■□□□ 1
Ccna1Q61456 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccna1Q61456 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ccna1Q61456 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccna1Q61456 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccna1Q61456 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccna1Q61456 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.28■■□□□ 1
Ccna1Q61456 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccna1Q61456 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccna1Q61456 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccna1Q61456 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccna1Q61456 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms