Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Clcn4Q61418 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn4Q61418 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clcn4Q61418 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Clcn4Q61418 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Clcn4Q61418 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn4Q61418 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Clcn4Q61418 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
Clcn4Q61418 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn4Q61418 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clcn4Q61418 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Clcn4Q61418 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Clcn4Q61418 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcn4Q61418 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Clcn4Q61418 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcn4Q61418 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clcn4Q61418 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn4Q61418 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn4Q61418 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn4Q61418 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn4Q61418 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn4Q61418 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn4Q61418 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Clcn4Q61418 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn4Q61418 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn4Q61418 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn4Q61418 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn4Q61418 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Clcn4Q61418 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn4Q61418 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clcn4Q61418 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Clcn4Q61418 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn4Q61418 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn4Q61418 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn4Q61418 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn4Q61418 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn4Q61418 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Clcn4Q61418 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn4Q61418 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Clcn4Q61418 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.5■□□□□ 0.39
Clcn4Q61418 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn4Q61418 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Clcn4Q61418 Gm8493-201ENSMUST00000196881 489 ntBASIC17.5■□□□□ 0.39
Clcn4Q61418 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.5■□□□□ 0.39
Clcn4Q61418 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Clcn4Q61418 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn4Q61418 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn4Q61418 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn4Q61418 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn4Q61418 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clcn4Q61418 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.5■□□□□ 0.39
Clcn4Q61418 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.5■□□□□ 0.39
Clcn4Q61418 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.49■□□□□ 0.39
Clcn4Q61418 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Clcn4Q61418 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Clcn4Q61418 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Clcn4Q61418 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clcn4Q61418 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn4Q61418 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn4Q61418 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn4Q61418 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Clcn4Q61418 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.48■□□□□ 0.39
Clcn4Q61418 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn4Q61418 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn4Q61418 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Clcn4Q61418 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn4Q61418 Golph3-205ENSMUST00000228671 2842 ntBASIC17.48■□□□□ 0.39
Clcn4Q61418 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn4Q61418 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn4Q61418 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn4Q61418 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn4Q61418 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn4Q61418 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clcn4Q61418 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn4Q61418 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn4Q61418 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.47■□□□□ 0.39
Clcn4Q61418 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Clcn4Q61418 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn4Q61418 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn4Q61418 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn4Q61418 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn4Q61418 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.47■□□□□ 0.39
Clcn4Q61418 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn4Q61418 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Clcn4Q61418 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.47■□□□□ 0.39
Clcn4Q61418 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn4Q61418 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clcn4Q61418 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms