Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim38Q5SZ99 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim38Q5SZ99 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim38Q5SZ99 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim38Q5SZ99 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim38Q5SZ99 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim38Q5SZ99 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim38Q5SZ99 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Gm27801-201ENSMUST00000184174 223 ntBASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim38Q5SZ99 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim38Q5SZ99 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim38Q5SZ99 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim38Q5SZ99 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim38Q5SZ99 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
Trim38Q5SZ99 Gm26833-201ENSMUST00000180899 440 ntBASIC19.77■□□□□ 0.76
Trim38Q5SZ99 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim38Q5SZ99 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Trim38Q5SZ99 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim38Q5SZ99 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.76■□□□□ 0.75
Trim38Q5SZ99 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Trim38Q5SZ99 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Trim38Q5SZ99 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim38Q5SZ99 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.76■□□□□ 0.75
Trim38Q5SZ99 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim38Q5SZ99 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim38Q5SZ99 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim38Q5SZ99 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim38Q5SZ99 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim38Q5SZ99 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim38Q5SZ99 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim38Q5SZ99 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim38Q5SZ99 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim38Q5SZ99 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim38Q5SZ99 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.73■□□□□ 0.75
Trim38Q5SZ99 Gm43017-201ENSMUST00000198296 752 ntBASIC19.73■□□□□ 0.75
Trim38Q5SZ99 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim38Q5SZ99 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim38Q5SZ99 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim38Q5SZ99 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms