Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf20Q5DTM8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf20Q5DTM8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rnf20Q5DTM8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf20Q5DTM8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Rnf20Q5DTM8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf20Q5DTM8 Gm40848-201ENSMUST00000221998 324 ntBASIC22.72■■□□□ 1.23
Rnf20Q5DTM8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC22.72■■□□□ 1.23
Rnf20Q5DTM8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf20Q5DTM8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf20Q5DTM8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Rnf20Q5DTM8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf20Q5DTM8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Rnf20Q5DTM8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf20Q5DTM8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rnf20Q5DTM8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rnf20Q5DTM8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.23
Rnf20Q5DTM8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf20Q5DTM8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf20Q5DTM8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.22
Rnf20Q5DTM8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.7■■□□□ 1.22
Rnf20Q5DTM8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.7■■□□□ 1.22
Rnf20Q5DTM8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.7■■□□□ 1.22
Rnf20Q5DTM8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf20Q5DTM8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Rnf20Q5DTM8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.7■■□□□ 1.22
Rnf20Q5DTM8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf20Q5DTM8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rnf20Q5DTM8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Rnf20Q5DTM8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Rnf20Q5DTM8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC22.68■■□□□ 1.22
Rnf20Q5DTM8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf20Q5DTM8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
Rnf20Q5DTM8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf20Q5DTM8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf20Q5DTM8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf20Q5DTM8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf20Q5DTM8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.68■■□□□ 1.22
Rnf20Q5DTM8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf20Q5DTM8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rnf20Q5DTM8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Rnf20Q5DTM8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf20Q5DTM8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf20Q5DTM8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf20Q5DTM8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf20Q5DTM8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf20Q5DTM8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Rnf20Q5DTM8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf20Q5DTM8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf20Q5DTM8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rnf20Q5DTM8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 Gm43060-201ENSMUST00000200621 289 ntBASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
Rnf20Q5DTM8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Rnf20Q5DTM8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf20Q5DTM8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.65■■□□□ 1.22
Rnf20Q5DTM8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf20Q5DTM8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms