Protein–RNA interactions for Protein: Q571G4

Lin54, Protein lin-54 homolog, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin54Q571G4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin54Q571G4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin54Q571G4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Lin54Q571G4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Lin54Q571G4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin54Q571G4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.53■□□□□ 0.24
Lin54Q571G4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.53■□□□□ 0.24
Lin54Q571G4 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.53■□□□□ 0.24
Lin54Q571G4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.53■□□□□ 0.24
Lin54Q571G4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin54Q571G4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin54Q571G4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Lin54Q571G4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lin54Q571G4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin54Q571G4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lin54Q571G4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin54Q571G4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin54Q571G4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lin54Q571G4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lin54Q571G4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Lin54Q571G4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lin54Q571G4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin54Q571G4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lin54Q571G4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin54Q571G4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lin54Q571G4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin54Q571G4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin54Q571G4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin54Q571G4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.51■□□□□ 0.23
Lin54Q571G4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin54Q571G4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin54Q571G4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Lin54Q571G4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lin54Q571G4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin54Q571G4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Lin54Q571G4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.5■□□□□ 0.23
Lin54Q571G4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.5■□□□□ 0.23
Lin54Q571G4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin54Q571G4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lin54Q571G4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin54Q571G4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin54Q571G4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.49■□□□□ 0.23
Lin54Q571G4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin54Q571G4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin54Q571G4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin54Q571G4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.49■□□□□ 0.23
Lin54Q571G4 Rarb-207ENSMUST00000225921 2756 ntBASIC16.49■□□□□ 0.23
Lin54Q571G4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin54Q571G4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin54Q571G4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin54Q571G4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Lin54Q571G4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin54Q571G4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin54Q571G4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lin54Q571G4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lin54Q571G4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin54Q571G4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin54Q571G4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin54Q571G4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin54Q571G4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin54Q571G4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin54Q571G4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin54Q571G4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin54Q571G4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin54Q571G4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin54Q571G4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.47■□□□□ 0.23
Lin54Q571G4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lin54Q571G4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
Lin54Q571G4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.47■□□□□ 0.23
Lin54Q571G4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Lin54Q571G4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.47■□□□□ 0.23
Lin54Q571G4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lin54Q571G4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Lin54Q571G4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms