Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cks1brtQ3UNC9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1brtQ3UNC9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1brtQ3UNC9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1brtQ3UNC9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1brtQ3UNC9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1brtQ3UNC9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1brtQ3UNC9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1brtQ3UNC9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1brtQ3UNC9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1brtQ3UNC9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1brtQ3UNC9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1brtQ3UNC9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cks1brtQ3UNC9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cks1brtQ3UNC9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cks1brtQ3UNC9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Cks1brtQ3UNC9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cks1brtQ3UNC9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Grk6-206ENSMUST00000224995 2971 ntBASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cks1brtQ3UNC9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1brtQ3UNC9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1brtQ3UNC9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1brtQ3UNC9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1brtQ3UNC9 Pkd1-207ENSMUST00000228550 1050 ntBASIC13.82□□□□□ -0.2
Cks1brtQ3UNC9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1brtQ3UNC9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1brtQ3UNC9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1brtQ3UNC9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1brtQ3UNC9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cks1brtQ3UNC9 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.82□□□□□ -0.2
Cks1brtQ3UNC9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cks1brtQ3UNC9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms