Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23■■□□□ 1.27
Col5a2Q3U962 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col5a2Q3U962 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col5a2Q3U962 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Col5a2Q3U962 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col5a2Q3U962 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col5a2Q3U962 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col5a2Q3U962 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Col5a2Q3U962 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col5a2Q3U962 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Col5a2Q3U962 Mir5122-201ENSMUST00000175004 89 ntBASIC22.98■■□□□ 1.27
Col5a2Q3U962 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col5a2Q3U962 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
Col5a2Q3U962 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Col5a2Q3U962 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Col5a2Q3U962 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col5a2Q3U962 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col5a2Q3U962 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Col5a2Q3U962 Nrn1-203ENSMUST00000223611 1443 ntBASIC22.97■■□□□ 1.27
Col5a2Q3U962 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col5a2Q3U962 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Col5a2Q3U962 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.97■■□□□ 1.27
Col5a2Q3U962 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col5a2Q3U962 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Col5a2Q3U962 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC22.97■■□□□ 1.27
Col5a2Q3U962 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col5a2Q3U962 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Col5a2Q3U962 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col5a2Q3U962 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col5a2Q3U962 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Col5a2Q3U962 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col5a2Q3U962 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
Col5a2Q3U962 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC22.95■■□□□ 1.26
Col5a2Q3U962 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Col5a2Q3U962 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Col5a2Q3U962 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
Col5a2Q3U962 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col5a2Q3U962 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col5a2Q3U962 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col5a2Q3U962 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col5a2Q3U962 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC22.94■■□□□ 1.26
Col5a2Q3U962 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Col5a2Q3U962 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.94■■□□□ 1.26
Col5a2Q3U962 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col5a2Q3U962 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col5a2Q3U962 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col5a2Q3U962 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.94■■□□□ 1.26
Col5a2Q3U962 Snhg20-203ENSMUST00000182811 2153 ntBASIC22.94■■□□□ 1.26
Col5a2Q3U962 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Col5a2Q3U962 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Col5a2Q3U962 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Col5a2Q3U962 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.93■■□□□ 1.26
Col5a2Q3U962 Gm10231-201ENSMUST00000181584 441 ntBASIC22.93■■□□□ 1.26
Col5a2Q3U962 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Col5a2Q3U962 Gm10175-202ENSMUST00000208752 441 ntBASIC22.93■■□□□ 1.26
Col5a2Q3U962 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC22.93■■□□□ 1.26
Col5a2Q3U962 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC22.93■■□□□ 1.26
Col5a2Q3U962 Gm9987-201ENSMUST00000069768 567 ntBASIC22.93■■□□□ 1.26
Col5a2Q3U962 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Col5a2Q3U962 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Col5a2Q3U962 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Col5a2Q3U962 Gm2399-201ENSMUST00000104944 225 ntBASIC22.92■■□□□ 1.26
Col5a2Q3U962 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Col5a2Q3U962 Gm15378-201ENSMUST00000121894 207 ntBASIC22.92■■□□□ 1.26
Col5a2Q3U962 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Col5a2Q3U962 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC22.92■■□□□ 1.26
Col5a2Q3U962 Cdkn3-203ENSMUST00000227149 1952 ntBASIC22.92■■□□□ 1.26
Col5a2Q3U962 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Col5a2Q3U962 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Col5a2Q3U962 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Col5a2Q3U962 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Col5a2Q3U962 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
Col5a2Q3U962 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.92■■□□□ 1.26
Col5a2Q3U962 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Col5a2Q3U962 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC22.92■■□□□ 1.26
Col5a2Q3U962 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC22.92■■□□□ 1.26
Col5a2Q3U962 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Col5a2Q3U962 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC22.92■■□□□ 1.26
Col5a2Q3U962 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Col5a2Q3U962 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col5a2Q3U962 Gm10167-201ENSMUST00000150411 1479 ntBASIC22.91■■□□□ 1.26
Col5a2Q3U962 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col5a2Q3U962 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Col5a2Q3U962 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.91■■□□□ 1.26
Col5a2Q3U962 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC22.91■■□□□ 1.26
Col5a2Q3U962 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC22.91■■□□□ 1.26
Col5a2Q3U962 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Col5a2Q3U962 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
Col5a2Q3U962 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col5a2Q3U962 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col5a2Q3U962 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col5a2Q3U962 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.9■■□□□ 1.26
Col5a2Q3U962 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC22.9■■□□□ 1.26
Col5a2Q3U962 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC22.9■■□□□ 1.26
Col5a2Q3U962 AC153881.2-201ENSMUST00000214877 204 ntBASIC22.9■■□□□ 1.26
Col5a2Q3U962 AC163280.1-201ENSMUST00000228194 1100 ntBASIC22.9■■□□□ 1.26
Col5a2Q3U962 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Col5a2Q3U962 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Col5a2Q3U962 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Col5a2Q3U962 CT010444.2-201ENSMUST00000217877 1629 ntBASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms