Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.18□□□□□ -0.3
Cops9Q3U898 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.18□□□□□ -0.3
Cops9Q3U898 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.18□□□□□ -0.3
Cops9Q3U898 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Cops9Q3U898 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cops9Q3U898 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cops9Q3U898 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cops9Q3U898 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops9Q3U898 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops9Q3U898 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops9Q3U898 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops9Q3U898 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops9Q3U898 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops9Q3U898 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops9Q3U898 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.17□□□□□ -0.3
Cops9Q3U898 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops9Q3U898 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cops9Q3U898 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cops9Q3U898 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cops9Q3U898 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cops9Q3U898 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cops9Q3U898 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.16□□□□□ -0.3
Cops9Q3U898 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.16□□□□□ -0.3
Cops9Q3U898 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops9Q3U898 Gm8503-201ENSMUST00000118131 455 ntBASIC13.16□□□□□ -0.3
Cops9Q3U898 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cops9Q3U898 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.16□□□□□ -0.3
Cops9Q3U898 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC13.16□□□□□ -0.3
Cops9Q3U898 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Cops9Q3U898 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops9Q3U898 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cops9Q3U898 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops9Q3U898 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops9Q3U898 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops9Q3U898 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops9Q3U898 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops9Q3U898 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.16□□□□□ -0.3
Cops9Q3U898 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cops9Q3U898 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cops9Q3U898 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Cops9Q3U898 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.15□□□□□ -0.3
Cops9Q3U898 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cops9Q3U898 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cops9Q3U898 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cops9Q3U898 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.15□□□□□ -0.31
Cops9Q3U898 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cops9Q3U898 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops9Q3U898 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops9Q3U898 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops9Q3U898 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cops9Q3U898 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops9Q3U898 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops9Q3U898 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops9Q3U898 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops9Q3U898 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cops9Q3U898 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops9Q3U898 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cops9Q3U898 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cops9Q3U898 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops9Q3U898 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops9Q3U898 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.13□□□□□ -0.31
Cops9Q3U898 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops9Q3U898 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops9Q3U898 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops9Q3U898 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.13□□□□□ -0.31
Cops9Q3U898 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cops9Q3U898 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cops9Q3U898 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops9Q3U898 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.13□□□□□ -0.31
Cops9Q3U898 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cops9Q3U898 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cops9Q3U898 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms