Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-1P50220 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-1P50220 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-1P50220 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-1P50220 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Nkx2-1P50220 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-1P50220 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkx2-1P50220 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.84■□□□□ 0.13
Nkx2-1P50220 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx2-1P50220 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx2-1P50220 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx2-1P50220 BC021767-201ENSMUST00000126387 1716 ntBASIC15.83■□□□□ 0.13
Nkx2-1P50220 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nkx2-1P50220 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-1P50220 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.83■□□□□ 0.12
Nkx2-1P50220 Gm5812-201ENSMUST00000061073 957 ntBASIC15.83■□□□□ 0.12
Nkx2-1P50220 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-1P50220 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-1P50220 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-1P50220 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkx2-1P50220 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkx2-1P50220 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.83■□□□□ 0.12
Nkx2-1P50220 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-1P50220 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkx2-1P50220 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-1P50220 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-1P50220 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-1P50220 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-1P50220 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Nkx2-1P50220 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.81■□□□□ 0.12
Nkx2-1P50220 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Nkx2-1P50220 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.81■□□□□ 0.12
Nkx2-1P50220 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-1P50220 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-1P50220 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Nkx2-1P50220 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.81■□□□□ 0.12
Nkx2-1P50220 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-1P50220 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkx2-1P50220 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.81■□□□□ 0.12
Nkx2-1P50220 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.8■□□□□ 0.12
Nkx2-1P50220 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.8■□□□□ 0.12
Nkx2-1P50220 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-1P50220 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.8■□□□□ 0.12
Nkx2-1P50220 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.8■□□□□ 0.12
Nkx2-1P50220 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkx2-1P50220 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Gm40881-201ENSMUST00000223397 166 ntBASIC15.79■□□□□ 0.12
Nkx2-1P50220 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkx2-1P50220 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Gm15546-201ENSMUST00000122095 826 ntBASIC15.78■□□□□ 0.12
Nkx2-1P50220 Gm15820-201ENSMUST00000201566 728 ntBASIC15.78■□□□□ 0.12
Nkx2-1P50220 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nkx2-1P50220 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms