Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rph3aP47708 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rph3aP47708 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rph3aP47708 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rph3aP47708 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.36■□□□□ 0.53
Rph3aP47708 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rph3aP47708 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rph3aP47708 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rph3aP47708 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.36■□□□□ 0.53
Rph3aP47708 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rph3aP47708 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rph3aP47708 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rph3aP47708 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rph3aP47708 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rph3aP47708 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rph3aP47708 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rph3aP47708 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rph3aP47708 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rph3aP47708 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rph3aP47708 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rph3aP47708 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.35■□□□□ 0.53
Rph3aP47708 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rph3aP47708 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rph3aP47708 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rph3aP47708 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rph3aP47708 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rph3aP47708 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rph3aP47708 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rph3aP47708 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rph3aP47708 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rph3aP47708 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rph3aP47708 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rph3aP47708 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rph3aP47708 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rph3aP47708 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Rph3aP47708 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.33■□□□□ 0.53
Rph3aP47708 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Rph3aP47708 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rph3aP47708 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rph3aP47708 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rph3aP47708 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
Rph3aP47708 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rph3aP47708 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rph3aP47708 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rph3aP47708 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rph3aP47708 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.33■□□□□ 0.52
Rph3aP47708 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rph3aP47708 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rph3aP47708 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rph3aP47708 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Rph3aP47708 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rph3aP47708 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rph3aP47708 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Rph3aP47708 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Rph3aP47708 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Rph3aP47708 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.32■□□□□ 0.52
Rph3aP47708 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rph3aP47708 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rph3aP47708 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rph3aP47708 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rph3aP47708 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rph3aP47708 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rph3aP47708 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rph3aP47708 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Rph3aP47708 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Rph3aP47708 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rph3aP47708 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.31■□□□□ 0.52
Rph3aP47708 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rph3aP47708 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rph3aP47708 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rph3aP47708 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rph3aP47708 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rph3aP47708 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rph3aP47708 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rph3aP47708 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rph3aP47708 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rph3aP47708 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rph3aP47708 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rph3aP47708 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.3■□□□□ 0.52
Rph3aP47708 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.3■□□□□ 0.52
Rph3aP47708 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rph3aP47708 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rph3aP47708 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rph3aP47708 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rph3aP47708 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rph3aP47708 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rph3aP47708 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Rph3aP47708 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Rph3aP47708 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rph3aP47708 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.29■□□□□ 0.52
Rph3aP47708 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.29■□□□□ 0.52
Rph3aP47708 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rph3aP47708 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rph3aP47708 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rph3aP47708 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.29■□□□□ 0.52
Rph3aP47708 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rph3aP47708 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rph3aP47708 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms