Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19■□□□□ 0.63
LdlrP35951 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LdlrP35951 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19■□□□□ 0.63
LdlrP35951 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LdlrP35951 Gm6085-201ENSMUST00000182774 1470 ntBASIC19■□□□□ 0.63
LdlrP35951 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19■□□□□ 0.63
LdlrP35951 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LdlrP35951 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LdlrP35951 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19■□□□□ 0.63
LdlrP35951 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LdlrP35951 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LdlrP35951 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LdlrP35951 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.99■□□□□ 0.63
LdlrP35951 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LdlrP35951 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LdlrP35951 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LdlrP35951 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LdlrP35951 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LdlrP35951 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LdlrP35951 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LdlrP35951 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.98■□□□□ 0.63
LdlrP35951 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LdlrP35951 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LdlrP35951 Gm43137-201ENSMUST00000198052 594 ntBASIC18.98■□□□□ 0.63
LdlrP35951 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
LdlrP35951 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.98■□□□□ 0.63
LdlrP35951 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.98■□□□□ 0.63
LdlrP35951 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LdlrP35951 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LdlrP35951 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LdlrP35951 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LdlrP35951 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LdlrP35951 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LdlrP35951 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LdlrP35951 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LdlrP35951 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LdlrP35951 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LdlrP35951 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
LdlrP35951 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.97■□□□□ 0.63
LdlrP35951 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LdlrP35951 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LdlrP35951 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LdlrP35951 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LdlrP35951 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LdlrP35951 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LdlrP35951 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
LdlrP35951 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LdlrP35951 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LdlrP35951 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LdlrP35951 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LdlrP35951 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LdlrP35951 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LdlrP35951 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.96■□□□□ 0.63
LdlrP35951 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LdlrP35951 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
LdlrP35951 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LdlrP35951 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LdlrP35951 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LdlrP35951 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LdlrP35951 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LdlrP35951 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LdlrP35951 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LdlrP35951 Mir7075-201ENSMUST00000184187 82 ntBASIC18.95■□□□□ 0.62
LdlrP35951 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LdlrP35951 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
LdlrP35951 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LdlrP35951 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LdlrP35951 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LdlrP35951 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LdlrP35951 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.95■□□□□ 0.62
LdlrP35951 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LdlrP35951 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LdlrP35951 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LdlrP35951 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LdlrP35951 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
LdlrP35951 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LdlrP35951 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LdlrP35951 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LdlrP35951 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LdlrP35951 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.94■□□□□ 0.62
LdlrP35951 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LdlrP35951 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LdlrP35951 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LdlrP35951 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LdlrP35951 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LdlrP35951 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LdlrP35951 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LdlrP35951 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LdlrP35951 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LdlrP35951 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LdlrP35951 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LdlrP35951 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.93■□□□□ 0.62
LdlrP35951 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LdlrP35951 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LdlrP35951 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LdlrP35951 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.93■□□□□ 0.62
LdlrP35951 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LdlrP35951 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LdlrP35951 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LdlrP35951 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms