Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxa4P06798 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxa4P06798 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxa4P06798 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa4P06798 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.88■□□□□ 0.61
Hoxa4P06798 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa4P06798 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.88■□□□□ 0.61
Hoxa4P06798 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa4P06798 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa4P06798 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Hoxa4P06798 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.87■□□□□ 0.61
Hoxa4P06798 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.87■□□□□ 0.61
Hoxa4P06798 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa4P06798 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hoxa4P06798 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa4P06798 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hoxa4P06798 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hoxa4P06798 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.87■□□□□ 0.61
Hoxa4P06798 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Hoxa4P06798 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa4P06798 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa4P06798 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa4P06798 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa4P06798 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa4P06798 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa4P06798 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa4P06798 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa4P06798 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa4P06798 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Hoxa4P06798 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa4P06798 Gm27405-201ENSMUST00000184201 112 ntBASIC18.86■□□□□ 0.61
Hoxa4P06798 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa4P06798 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Hoxa4P06798 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa4P06798 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa4P06798 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.85■□□□□ 0.61
Hoxa4P06798 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hoxa4P06798 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hoxa4P06798 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa4P06798 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa4P06798 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa4P06798 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa4P06798 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa4P06798 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa4P06798 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa4P06798 Gm42569-201ENSMUST00000200539 472 ntBASIC18.85■□□□□ 0.61
Hoxa4P06798 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.85■□□□□ 0.61
Hoxa4P06798 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa4P06798 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.85■□□□□ 0.61
Hoxa4P06798 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa4P06798 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.85■□□□□ 0.61
Hoxa4P06798 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa4P06798 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa4P06798 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa4P06798 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa4P06798 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa4P06798 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa4P06798 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa4P06798 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxa4P06798 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Hoxa4P06798 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxa4P06798 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxa4P06798 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.83■□□□□ 0.6
Hoxa4P06798 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.83■□□□□ 0.6
Hoxa4P06798 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.83■□□□□ 0.6
Hoxa4P06798 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.83■□□□□ 0.6
Hoxa4P06798 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hoxa4P06798 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa4P06798 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa4P06798 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.82■□□□□ 0.6
Hoxa4P06798 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa4P06798 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
Hoxa4P06798 Gm7514-201ENSMUST00000209475 934 ntBASIC18.82■□□□□ 0.6
Hoxa4P06798 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
Hoxa4P06798 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa4P06798 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa4P06798 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa4P06798 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa4P06798 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa4P06798 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hoxa4P06798 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa4P06798 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Hoxa4P06798 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa4P06798 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.81■□□□□ 0.6
Hoxa4P06798 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.81■□□□□ 0.6
Hoxa4P06798 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa4P06798 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa4P06798 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa4P06798 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa4P06798 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa4P06798 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa4P06798 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa4P06798 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa4P06798 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa4P06798 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa4P06798 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa4P06798 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa4P06798 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa4P06798 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.8■□□□□ 0.6
Hoxa4P06798 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms