Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P06328 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
P06328 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
P06328 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
P06328 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC13.97□□□□□ -0.17
P06328 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P06328 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P06328 BC021767-201ENSMUST00000126387 1716 ntBASIC13.97□□□□□ -0.17
P06328 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P06328 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P06328 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
P06328 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P06328 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
P06328 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC13.97□□□□□ -0.17
P06328 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
P06328 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
P06328 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
P06328 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
P06328 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P06328 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
P06328 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
P06328 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
P06328 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.96□□□□□ -0.17
P06328 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P06328 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
P06328 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
P06328 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
P06328 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
P06328 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
P06328 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 Rncr4-201ENSMUST00000194541 2234 ntBASIC13.95□□□□□ -0.18
P06328 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
P06328 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
P06328 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
P06328 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
P06328 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P06328 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.94□□□□□ -0.18
P06328 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.94□□□□□ -0.18
P06328 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
P06328 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
P06328 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
P06328 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
P06328 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P06328 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
P06328 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P06328 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.93□□□□□ -0.18
P06328 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P06328 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
P06328 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
P06328 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
P06328 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P06328 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.93□□□□□ -0.18
P06328 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P06328 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC13.93□□□□□ -0.18
P06328 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
P06328 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
P06328 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P06328 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.92□□□□□ -0.18
P06328 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06328 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.92□□□□□ -0.18
P06328 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06328 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06328 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06328 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06328 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
P06328 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
P06328 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.92□□□□□ -0.18
P06328 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P06328 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.92□□□□□ -0.18
P06328 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P06328 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms