Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfb1P04202 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.71■□□□□ 0.43
Tgfb1P04202 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfb1P04202 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfb1P04202 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfb1P04202 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tgfb1P04202 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tgfb1P04202 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tgfb1P04202 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfb1P04202 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.7■□□□□ 0.42
Tgfb1P04202 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.7■□□□□ 0.42
Tgfb1P04202 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfb1P04202 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Tgfb1P04202 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfb1P04202 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfb1P04202 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfb1P04202 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfb1P04202 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tgfb1P04202 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tgfb1P04202 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfb1P04202 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfb1P04202 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfb1P04202 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfb1P04202 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfb1P04202 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfb1P04202 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfb1P04202 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.69■□□□□ 0.42
Tgfb1P04202 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tgfb1P04202 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfb1P04202 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Tgfb1P04202 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Tgfb1P04202 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfb1P04202 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tgfb1P04202 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Tgfb1P04202 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.68■□□□□ 0.42
Tgfb1P04202 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Tgfb1P04202 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Tgfb1P04202 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfb1P04202 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Tgfb1P04202 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfb1P04202 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tgfb1P04202 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.68■□□□□ 0.42
Tgfb1P04202 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfb1P04202 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfb1P04202 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tgfb1P04202 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfb1P04202 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tgfb1P04202 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tgfb1P04202 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Tgfb1P04202 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tgfb1P04202 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tgfb1P04202 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
Tgfb1P04202 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tgfb1P04202 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tgfb1P04202 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tgfb1P04202 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Tgfb1P04202 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tgfb1P04202 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfb1P04202 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfb1P04202 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfb1P04202 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tgfb1P04202 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Tgfb1P04202 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tgfb1P04202 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfb1P04202 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfb1P04202 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Tgfb1P04202 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
Tgfb1P04202 Gm11421-201ENSMUST00000122124 294 ntBASIC17.65■□□□□ 0.42
Tgfb1P04202 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.65■□□□□ 0.42
Tgfb1P04202 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfb1P04202 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfb1P04202 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Tgfb1P04202 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfb1P04202 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tgfb1P04202 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tgfb1P04202 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
Tgfb1P04202 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tgfb1P04202 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.64■□□□□ 0.42
Tgfb1P04202 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tgfb1P04202 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tgfb1P04202 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.64■□□□□ 0.41
Tgfb1P04202 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tgfb1P04202 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.64■□□□□ 0.41
Tgfb1P04202 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.64■□□□□ 0.41
Tgfb1P04202 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tgfb1P04202 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Tgfb1P04202 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tgfb1P04202 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tgfb1P04202 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tgfb1P04202 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.64■□□□□ 0.41
Tgfb1P04202 BC021767-201ENSMUST00000126387 1716 ntBASIC17.64■□□□□ 0.41
Tgfb1P04202 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.64■□□□□ 0.41
Tgfb1P04202 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tgfb1P04202 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Tgfb1P04202 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfb1P04202 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfb1P04202 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfb1P04202 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfb1P04202 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tgfb1P04202 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 139.1 ms