Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CopeO89079 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CopeO89079 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.71■□□□□ 0.75
CopeO89079 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CopeO89079 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CopeO89079 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CopeO89079 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CopeO89079 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CopeO89079 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.71■□□□□ 0.75
CopeO89079 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.71■□□□□ 0.75
CopeO89079 Gm5812-201ENSMUST00000061073 957 ntBASIC19.71■□□□□ 0.75
CopeO89079 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.71■□□□□ 0.75
CopeO89079 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CopeO89079 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CopeO89079 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.7■□□□□ 0.74
CopeO89079 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CopeO89079 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CopeO89079 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.7■□□□□ 0.74
CopeO89079 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CopeO89079 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.7■□□□□ 0.74
CopeO89079 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CopeO89079 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.7■□□□□ 0.74
CopeO89079 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CopeO89079 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CopeO89079 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CopeO89079 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CopeO89079 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CopeO89079 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CopeO89079 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CopeO89079 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopeO89079 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CopeO89079 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopeO89079 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CopeO89079 Gm15546-201ENSMUST00000122095 826 ntBASIC19.69■□□□□ 0.74
CopeO89079 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CopeO89079 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopeO89079 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CopeO89079 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CopeO89079 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CopeO89079 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CopeO89079 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CopeO89079 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CopeO89079 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CopeO89079 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CopeO89079 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CopeO89079 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CopeO89079 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CopeO89079 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CopeO89079 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CopeO89079 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CopeO89079 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.66■□□□□ 0.74
CopeO89079 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CopeO89079 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CopeO89079 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.66■□□□□ 0.74
CopeO89079 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CopeO89079 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CopeO89079 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CopeO89079 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CopeO89079 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CopeO89079 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CopeO89079 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CopeO89079 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CopeO89079 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CopeO89079 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CopeO89079 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
CopeO89079 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CopeO89079 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CopeO89079 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.65■□□□□ 0.74
CopeO89079 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CopeO89079 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CopeO89079 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CopeO89079 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CopeO89079 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CopeO89079 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CopeO89079 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.64■□□□□ 0.73
CopeO89079 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CopeO89079 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CopeO89079 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.64■□□□□ 0.73
CopeO89079 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.64■□□□□ 0.73
CopeO89079 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CopeO89079 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.64■□□□□ 0.73
CopeO89079 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CopeO89079 Gm9959-201ENSMUST00000068277 390 ntBASIC19.64■□□□□ 0.73
CopeO89079 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CopeO89079 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CopeO89079 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.64■□□□□ 0.73
CopeO89079 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CopeO89079 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms