Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hcn1O88704 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hcn1O88704 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hcn1O88704 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Hcn1O88704 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hcn1O88704 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn1O88704 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn1O88704 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn1O88704 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn1O88704 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Hcn1O88704 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn1O88704 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn1O88704 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hcn1O88704 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.21■□□□□ 0.51
Hcn1O88704 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.21■□□□□ 0.51
Hcn1O88704 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn1O88704 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn1O88704 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn1O88704 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Hcn1O88704 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hcn1O88704 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Hcn1O88704 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn1O88704 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Hcn1O88704 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Hcn1O88704 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Hcn1O88704 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn1O88704 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.2■□□□□ 0.5
Hcn1O88704 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn1O88704 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn1O88704 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn1O88704 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn1O88704 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn1O88704 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn1O88704 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hcn1O88704 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn1O88704 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn1O88704 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Hcn1O88704 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hcn1O88704 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hcn1O88704 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn1O88704 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn1O88704 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn1O88704 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn1O88704 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn1O88704 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.19■□□□□ 0.5
Hcn1O88704 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Hcn1O88704 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn1O88704 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn1O88704 Smad6-203ENSMUST00000179458 273 ntBASIC18.19■□□□□ 0.5
Hcn1O88704 Gm26833-201ENSMUST00000180899 440 ntBASIC18.19■□□□□ 0.5
Hcn1O88704 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn1O88704 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn1O88704 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn1O88704 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn1O88704 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hcn1O88704 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcn1O88704 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.18■□□□□ 0.5
Hcn1O88704 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hcn1O88704 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.18■□□□□ 0.5
Hcn1O88704 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hcn1O88704 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hcn1O88704 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.18■□□□□ 0.5
Hcn1O88704 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hcn1O88704 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.18■□□□□ 0.5
Hcn1O88704 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hcn1O88704 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hcn1O88704 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hcn1O88704 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn1O88704 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn1O88704 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Hcn1O88704 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Hcn1O88704 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn1O88704 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Hcn1O88704 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.17■□□□□ 0.5
Hcn1O88704 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn1O88704 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn1O88704 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.17■□□□□ 0.5
Hcn1O88704 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn1O88704 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn1O88704 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hcn1O88704 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Hcn1O88704 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcn1O88704 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Hcn1O88704 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hcn1O88704 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Hcn1O88704 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Hcn1O88704 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.15■□□□□ 0.5
Hcn1O88704 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Hcn1O88704 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.15■□□□□ 0.5
Hcn1O88704 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Hcn1O88704 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms