Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Slc6a20bO88575 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Slc6a20bO88575 Gm11643-201ENSMUST00000119578 864 ntBASIC21.01■□□□□ 0.95
Slc6a20bO88575 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Slc6a20bO88575 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc6a20bO88575 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Slc6a20bO88575 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a20bO88575 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a20bO88575 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a20bO88575 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slc6a20bO88575 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a20bO88575 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a20bO88575 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slc6a20bO88575 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21■□□□□ 0.95
Slc6a20bO88575 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slc6a20bO88575 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21■□□□□ 0.95
Slc6a20bO88575 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Slc6a20bO88575 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a20bO88575 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a20bO88575 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
Slc6a20bO88575 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.99■□□□□ 0.95
Slc6a20bO88575 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a20bO88575 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Slc6a20bO88575 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.98■□□□□ 0.95
Slc6a20bO88575 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Slc6a20bO88575 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Slc6a20bO88575 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Slc6a20bO88575 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Slc6a20bO88575 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a20bO88575 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a20bO88575 Gm18666-201ENSMUST00000190039 958 ntBASIC20.97■□□□□ 0.95
Slc6a20bO88575 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a20bO88575 Gm9987-201ENSMUST00000069768 567 ntBASIC20.97■□□□□ 0.95
Slc6a20bO88575 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a20bO88575 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.97■□□□□ 0.95
Slc6a20bO88575 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.97■□□□□ 0.95
Slc6a20bO88575 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a20bO88575 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Slc6a20bO88575 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a20bO88575 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.97■□□□□ 0.95
Slc6a20bO88575 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a20bO88575 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Slc6a20bO88575 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a20bO88575 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a20bO88575 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.96■□□□□ 0.95
Slc6a20bO88575 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a20bO88575 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a20bO88575 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a20bO88575 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a20bO88575 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Slc6a20bO88575 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a20bO88575 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Slc6a20bO88575 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Slc6a20bO88575 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Slc6a20bO88575 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Slc6a20bO88575 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a20bO88575 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a20bO88575 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a20bO88575 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a20bO88575 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.95■□□□□ 0.94
Slc6a20bO88575 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.95■□□□□ 0.94
Slc6a20bO88575 Mir1199-201ENSMUST00000117015 119 ntBASIC20.95■□□□□ 0.94
Slc6a20bO88575 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.95■□□□□ 0.94
Slc6a20bO88575 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a20bO88575 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a20bO88575 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Slc6a20bO88575 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a20bO88575 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Slc6a20bO88575 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Slc6a20bO88575 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.94■□□□□ 0.94
Slc6a20bO88575 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc6a20bO88575 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.94■□□□□ 0.94
Slc6a20bO88575 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.94■□□□□ 0.94
Slc6a20bO88575 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc6a20bO88575 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.94■□□□□ 0.94
Slc6a20bO88575 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc6a20bO88575 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Slc6a20bO88575 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
Slc6a20bO88575 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a20bO88575 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a20bO88575 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a20bO88575 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.93■□□□□ 0.94
Slc6a20bO88575 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Slc6a20bO88575 Gm44549-201ENSMUST00000208351 577 ntBASIC20.93■□□□□ 0.94
Slc6a20bO88575 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Slc6a20bO88575 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.93■□□□□ 0.94
Slc6a20bO88575 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Slc6a20bO88575 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms