Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Cldn1O88551 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cldn1O88551 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn1O88551 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn1O88551 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cldn1O88551 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.33■□□□□ 0.2
Cldn1O88551 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.33■□□□□ 0.2
Cldn1O88551 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cldn1O88551 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cldn1O88551 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn1O88551 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn1O88551 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn1O88551 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn1O88551 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn1O88551 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.32■□□□□ 0.2
Cldn1O88551 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn1O88551 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn1O88551 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn1O88551 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cldn1O88551 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cldn1O88551 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cldn1O88551 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.31■□□□□ 0.2
Cldn1O88551 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.31■□□□□ 0.2
Cldn1O88551 Gm6211-202ENSMUST00000167849 925 ntBASIC16.31■□□□□ 0.2
Cldn1O88551 Trmt13-210ENSMUST00000198454 880 ntBASIC16.31■□□□□ 0.2
Cldn1O88551 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.31■□□□□ 0.2
Cldn1O88551 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.31■□□□□ 0.2
Cldn1O88551 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.31■□□□□ 0.2
Cldn1O88551 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.31■□□□□ 0.2
Cldn1O88551 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cldn1O88551 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cldn1O88551 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn1O88551 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn1O88551 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cldn1O88551 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.3■□□□□ 0.2
Cldn1O88551 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn1O88551 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn1O88551 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn1O88551 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn1O88551 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.3■□□□□ 0.2
Cldn1O88551 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.3■□□□□ 0.2
Cldn1O88551 Gm38205-201ENSMUST00000192243 258 ntBASIC16.3■□□□□ 0.2
Cldn1O88551 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.3■□□□□ 0.2
Cldn1O88551 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.3■□□□□ 0.2
Cldn1O88551 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn1O88551 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn1O88551 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn1O88551 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn1O88551 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cldn1O88551 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cldn1O88551 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn1O88551 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cldn1O88551 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cldn1O88551 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn1O88551 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn1O88551 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cldn1O88551 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn1O88551 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.29■□□□□ 0.2
Cldn1O88551 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn1O88551 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.29■□□□□ 0.2
Cldn1O88551 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cldn1O88551 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.29■□□□□ 0.2
Cldn1O88551 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.29■□□□□ 0.2
Cldn1O88551 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn1O88551 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn1O88551 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms