Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tulp3O88413 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tulp3O88413 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tulp3O88413 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tulp3O88413 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tulp3O88413 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tulp3O88413 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.82■□□□□ 0.44
Tulp3O88413 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tulp3O88413 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Tulp3O88413 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.81■□□□□ 0.44
Tulp3O88413 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.81■□□□□ 0.44
Tulp3O88413 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Tulp3O88413 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tulp3O88413 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tulp3O88413 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tulp3O88413 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.8■□□□□ 0.44
Tulp3O88413 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tulp3O88413 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tulp3O88413 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tulp3O88413 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.8■□□□□ 0.44
Tulp3O88413 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tulp3O88413 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tulp3O88413 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tulp3O88413 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Tulp3O88413 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tulp3O88413 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tulp3O88413 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tulp3O88413 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tulp3O88413 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tulp3O88413 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Tulp3O88413 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tulp3O88413 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Tulp3O88413 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tulp3O88413 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tulp3O88413 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tulp3O88413 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tulp3O88413 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tulp3O88413 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tulp3O88413 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tulp3O88413 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tulp3O88413 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tulp3O88413 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tulp3O88413 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tulp3O88413 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.79■□□□□ 0.44
Tulp3O88413 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tulp3O88413 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tulp3O88413 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.79■□□□□ 0.44
Tulp3O88413 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tulp3O88413 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
Tulp3O88413 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tulp3O88413 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tulp3O88413 Gm15820-201ENSMUST00000201566 728 ntBASIC17.78■□□□□ 0.44
Tulp3O88413 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.78■□□□□ 0.44
Tulp3O88413 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tulp3O88413 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tulp3O88413 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tulp3O88413 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tulp3O88413 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tulp3O88413 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Tulp3O88413 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tulp3O88413 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tulp3O88413 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Tulp3O88413 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tulp3O88413 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Tulp3O88413 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.77■□□□□ 0.44
Tulp3O88413 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tulp3O88413 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.77■□□□□ 0.44
Tulp3O88413 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tulp3O88413 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.77■□□□□ 0.44
Tulp3O88413 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms