Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tgfbr3O88393 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tgfbr3O88393 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tgfbr3O88393 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tgfbr3O88393 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tgfbr3O88393 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tgfbr3O88393 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tgfbr3O88393 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tgfbr3O88393 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tgfbr3O88393 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tgfbr3O88393 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tgfbr3O88393 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.25■□□□□ 0.51
Tgfbr3O88393 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tgfbr3O88393 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tgfbr3O88393 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tgfbr3O88393 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tgfbr3O88393 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tgfbr3O88393 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tgfbr3O88393 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Tgfbr3O88393 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tgfbr3O88393 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tgfbr3O88393 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
Tgfbr3O88393 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Tgfbr3O88393 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tgfbr3O88393 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Tgfbr3O88393 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tgfbr3O88393 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tgfbr3O88393 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tgfbr3O88393 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tgfbr3O88393 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tgfbr3O88393 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tgfbr3O88393 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tgfbr3O88393 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tgfbr3O88393 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tgfbr3O88393 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.23■□□□□ 0.51
Tgfbr3O88393 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tgfbr3O88393 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tgfbr3O88393 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tgfbr3O88393 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tgfbr3O88393 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tgfbr3O88393 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tgfbr3O88393 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tgfbr3O88393 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tgfbr3O88393 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.22■□□□□ 0.51
Tgfbr3O88393 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tgfbr3O88393 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tgfbr3O88393 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tgfbr3O88393 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tgfbr3O88393 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Tgfbr3O88393 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.21■□□□□ 0.51
Tgfbr3O88393 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.21■□□□□ 0.51
Tgfbr3O88393 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tgfbr3O88393 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tgfbr3O88393 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tgfbr3O88393 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tgfbr3O88393 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tgfbr3O88393 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Tgfbr3O88393 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Tgfbr3O88393 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Tgfbr3O88393 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
Tgfbr3O88393 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Tgfbr3O88393 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tgfbr3O88393 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.2■□□□□ 0.5
Tgfbr3O88393 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Gm27275-201ENSMUST00000184318 272 ntBASIC18.2■□□□□ 0.5
Tgfbr3O88393 Mir7071-201ENSMUST00000184847 69 ntBASIC18.2■□□□□ 0.5
Tgfbr3O88393 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tgfbr3O88393 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbr3O88393 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbr3O88393 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbr3O88393 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.19■□□□□ 0.5
Tgfbr3O88393 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.19■□□□□ 0.5
Tgfbr3O88393 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tgfbr3O88393 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbr3O88393 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tgfbr3O88393 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbr3O88393 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
Tgfbr3O88393 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfbr3O88393 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.19■□□□□ 0.5
Tgfbr3O88393 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.19■□□□□ 0.5
Tgfbr3O88393 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbr3O88393 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbr3O88393 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbr3O88393 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.18■□□□□ 0.5
Tgfbr3O88393 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.18■□□□□ 0.5
Tgfbr3O88393 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbr3O88393 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms