Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ubr1O70481 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Ubr1O70481 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Ubr1O70481 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ubr1O70481 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ubr1O70481 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC25.22■■□□□ 1.63
Ubr1O70481 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ubr1O70481 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ubr1O70481 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ubr1O70481 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC25.21■■□□□ 1.63
Ubr1O70481 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ubr1O70481 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Ubr1O70481 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC25.21■■□□□ 1.63
Ubr1O70481 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC25.21■■□□□ 1.63
Ubr1O70481 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ubr1O70481 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ubr1O70481 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
Ubr1O70481 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
Ubr1O70481 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Ubr1O70481 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Ubr1O70481 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ubr1O70481 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ubr1O70481 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
Ubr1O70481 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Ubr1O70481 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC25.19■■□□□ 1.62
Ubr1O70481 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Ubr1O70481 Gm10812-201ENSMUST00000099864 546 ntBASIC25.19■■□□□ 1.62
Ubr1O70481 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Ubr1O70481 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ubr1O70481 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ubr1O70481 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ubr1O70481 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC25.18■■□□□ 1.62
Ubr1O70481 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC25.18■■□□□ 1.62
Ubr1O70481 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ubr1O70481 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ubr1O70481 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ubr1O70481 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ubr1O70481 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Ubr1O70481 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ubr1O70481 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ubr1O70481 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Ubr1O70481 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC25.18■■□□□ 1.62
Ubr1O70481 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ubr1O70481 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Ubr1O70481 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC25.18■■□□□ 1.62
Ubr1O70481 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ubr1O70481 Dio3-201ENSMUST00000097228 1449 ntBASIC25.17■■□□□ 1.62
Ubr1O70481 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ubr1O70481 Gm43672-201ENSMUST00000199072 1731 ntBASIC25.17■■□□□ 1.62
Ubr1O70481 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ubr1O70481 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ubr1O70481 Gm21596-201ENSMUST00000178049 1316 ntBASIC25.16■■□□□ 1.62
Ubr1O70481 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ubr1O70481 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ubr1O70481 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Ubr1O70481 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC25.16■■□□□ 1.62
Ubr1O70481 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Ubr1O70481 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ubr1O70481 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
Ubr1O70481 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC25.15■■□□□ 1.62
Ubr1O70481 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ubr1O70481 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ubr1O70481 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ubr1O70481 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ubr1O70481 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ubr1O70481 Gm12896-201ENSMUST00000118430 226 ntBASIC25.14■■□□□ 1.62
Ubr1O70481 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC25.14■■□□□ 1.62
Ubr1O70481 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Ubr1O70481 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
Ubr1O70481 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ubr1O70481 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC25.13■■□□□ 1.61
Ubr1O70481 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ubr1O70481 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC25.13■■□□□ 1.61
Ubr1O70481 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ubr1O70481 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ubr1O70481 Gm37352-201ENSMUST00000193908 2181 ntBASIC25.13■■□□□ 1.61
Ubr1O70481 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ubr1O70481 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ubr1O70481 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ubr1O70481 Gm13181-201ENSMUST00000120117 1069 ntBASIC25.13■■□□□ 1.61
Ubr1O70481 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Ubr1O70481 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ubr1O70481 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC25.12■■□□□ 1.61
Ubr1O70481 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ubr1O70481 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC25.11■■□□□ 1.61
Ubr1O70481 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ubr1O70481 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ubr1O70481 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ubr1O70481 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Ubr1O70481 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ubr1O70481 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ubr1O70481 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Ubr1O70481 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Ubr1O70481 Gm19094-201ENSMUST00000209791 1246 ntBASIC25.1■■□□□ 1.61
Ubr1O70481 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ubr1O70481 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ubr1O70481 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ubr1O70481 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ubr1O70481 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ubr1O70481 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC25.09■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 157.1 ms