Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ldb2O55203 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ldb2O55203 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ldb2O55203 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ldb2O55203 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ldb2O55203 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ldb2O55203 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ldb2O55203 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ldb2O55203 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ldb2O55203 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ldb2O55203 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ldb2O55203 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Ldb2O55203 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.04■□□□□ 0.64
Ldb2O55203 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.04■□□□□ 0.64
Ldb2O55203 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ldb2O55203 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ldb2O55203 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ldb2O55203 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ldb2O55203 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ldb2O55203 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ldb2O55203 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb2O55203 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb2O55203 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb2O55203 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb2O55203 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ldb2O55203 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb2O55203 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb2O55203 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.03■□□□□ 0.64
Ldb2O55203 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ldb2O55203 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.03■□□□□ 0.64
Ldb2O55203 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb2O55203 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb2O55203 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb2O55203 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ldb2O55203 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ldb2O55203 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ldb2O55203 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ldb2O55203 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ldb2O55203 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Ldb2O55203 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ldb2O55203 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.02■□□□□ 0.64
Ldb2O55203 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ldb2O55203 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.02■□□□□ 0.64
Ldb2O55203 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ldb2O55203 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
Ldb2O55203 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Ldb2O55203 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb2O55203 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb2O55203 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ldb2O55203 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ldb2O55203 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ldb2O55203 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ldb2O55203 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ldb2O55203 Gm7860-201ENSMUST00000121190 879 ntBASIC19■□□□□ 0.63
Ldb2O55203 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb2O55203 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19■□□□□ 0.63
Ldb2O55203 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19■□□□□ 0.63
Ldb2O55203 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
Ldb2O55203 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19■□□□□ 0.63
Ldb2O55203 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19■□□□□ 0.63
Ldb2O55203 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb2O55203 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ldb2O55203 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb2O55203 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb2O55203 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ldb2O55203 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19■□□□□ 0.63
Ldb2O55203 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ldb2O55203 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb2O55203 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb2O55203 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb2O55203 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb2O55203 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb2O55203 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb2O55203 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ldb2O55203 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.98■□□□□ 0.63
Ldb2O55203 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Ldb2O55203 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ldb2O55203 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb2O55203 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb2O55203 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb2O55203 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb2O55203 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.97■□□□□ 0.63
Ldb2O55203 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb2O55203 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb2O55203 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ldb2O55203 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Ldb2O55203 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ldb2O55203 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms