Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6dO55057 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Pde6dO55057 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6dO55057 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6dO55057 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6dO55057 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pde6dO55057 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pde6dO55057 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Pde6dO55057 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.1■□□□□ 0.01
Pde6dO55057 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pde6dO55057 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Pde6dO55057 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.1■□□□□ 0.01
Pde6dO55057 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pde6dO55057 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Pde6dO55057 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pde6dO55057 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pde6dO55057 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pde6dO55057 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.09■□□□□ 0.01
Pde6dO55057 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Pde6dO55057 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pde6dO55057 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.09■□□□□ 0.01
Pde6dO55057 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pde6dO55057 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.09■□□□□ 0.01
Pde6dO55057 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.09■□□□□ 0.01
Pde6dO55057 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pde6dO55057 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pde6dO55057 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pde6dO55057 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pde6dO55057 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pde6dO55057 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Pde6dO55057 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pde6dO55057 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6dO55057 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6dO55057 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6dO55057 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6dO55057 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pde6dO55057 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pde6dO55057 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.08■□□□□ 0
Pde6dO55057 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6dO55057 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pde6dO55057 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6dO55057 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pde6dO55057 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6dO55057 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Pde6dO55057 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6dO55057 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.07■□□□□ 0
Pde6dO55057 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6dO55057 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pde6dO55057 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.07■□□□□ 0
Pde6dO55057 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pde6dO55057 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pde6dO55057 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pde6dO55057 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.07■□□□□ 0
Pde6dO55057 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6dO55057 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6dO55057 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Pde6dO55057 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pde6dO55057 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6dO55057 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6dO55057 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Pde6dO55057 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.06■□□□□ 0
Pde6dO55057 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.06■□□□□ 0
Pde6dO55057 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.06■□□□□ 0
Pde6dO55057 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pde6dO55057 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.06■□□□□ 0
Pde6dO55057 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.06■□□□□ 0
Pde6dO55057 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pde6dO55057 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pde6dO55057 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pde6dO55057 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pde6dO55057 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Pde6dO55057 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pde6dO55057 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms