Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf13O54965 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf13O54965 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rnf13O54965 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf13O54965 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Rnf13O54965 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf13O54965 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rnf13O54965 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
Rnf13O54965 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf13O54965 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf13O54965 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf13O54965 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf13O54965 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.31■□□□□ 0.36
Rnf13O54965 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf13O54965 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.31■□□□□ 0.36
Rnf13O54965 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf13O54965 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rnf13O54965 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Rnf13O54965 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rnf13O54965 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Gm22238-201ENSMUST00000175222 88 ntBASIC17.3■□□□□ 0.36
Rnf13O54965 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Gm9959-201ENSMUST00000068277 390 ntBASIC17.3■□□□□ 0.36
Rnf13O54965 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.3■□□□□ 0.36
Rnf13O54965 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.3■□□□□ 0.36
Rnf13O54965 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.3■□□□□ 0.36
Rnf13O54965 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rnf13O54965 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf13O54965 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf13O54965 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf13O54965 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf13O54965 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rnf13O54965 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf13O54965 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf13O54965 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf13O54965 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.29■□□□□ 0.36
Rnf13O54965 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.29■□□□□ 0.36
Rnf13O54965 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf13O54965 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf13O54965 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf13O54965 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf13O54965 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Rnf13O54965 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf13O54965 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf13O54965 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf13O54965 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf13O54965 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf13O54965 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf13O54965 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rnf13O54965 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf13O54965 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf13O54965 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.28■□□□□ 0.36
Rnf13O54965 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf13O54965 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.28■□□□□ 0.36
Rnf13O54965 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf13O54965 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf13O54965 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf13O54965 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf13O54965 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf13O54965 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf13O54965 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rnf13O54965 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf13O54965 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf13O54965 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.27■□□□□ 0.36
Rnf13O54965 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf13O54965 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf13O54965 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.26■□□□□ 0.35
Rnf13O54965 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.26■□□□□ 0.35
Rnf13O54965 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Rnf13O54965 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.26■□□□□ 0.35
Rnf13O54965 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.26■□□□□ 0.35
Rnf13O54965 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf13O54965 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Rnf13O54965 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf13O54965 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rnf13O54965 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf13O54965 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rnf13O54965 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms