Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm2O35900 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm2O35900 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lsm2O35900 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Lsm2O35900 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm2O35900 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm2O35900 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm2O35900 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Lsm2O35900 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lsm2O35900 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm2O35900 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm2O35900 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm2O35900 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.08■□□□□ 0.32
Lsm2O35900 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lsm2O35900 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Lsm2O35900 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Lsm2O35900 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm2O35900 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm2O35900 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm2O35900 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm2O35900 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm2O35900 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm2O35900 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.07■□□□□ 0.32
Lsm2O35900 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.07■□□□□ 0.32
Lsm2O35900 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm2O35900 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm2O35900 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lsm2O35900 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm2O35900 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm2O35900 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm2O35900 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.06■□□□□ 0.32
Lsm2O35900 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Lsm2O35900 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm2O35900 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Lsm2O35900 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lsm2O35900 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.05■□□□□ 0.32
Lsm2O35900 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lsm2O35900 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Lsm2O35900 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm2O35900 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.05■□□□□ 0.32
Lsm2O35900 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm2O35900 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.05■□□□□ 0.32
Lsm2O35900 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm2O35900 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.05■□□□□ 0.32
Lsm2O35900 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm2O35900 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lsm2O35900 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm2O35900 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm2O35900 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm2O35900 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm2O35900 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm2O35900 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm2O35900 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm2O35900 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm2O35900 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm2O35900 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm2O35900 Gm5921-201ENSMUST00000075898 882 ntBASIC17.04■□□□□ 0.32
Lsm2O35900 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm2O35900 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm2O35900 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm2O35900 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.04■□□□□ 0.32
Lsm2O35900 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.04■□□□□ 0.32
Lsm2O35900 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Lsm2O35900 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lsm2O35900 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm2O35900 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.04■□□□□ 0.32
Lsm2O35900 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Lsm2O35900 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.03■□□□□ 0.32
Lsm2O35900 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.03■□□□□ 0.32
Lsm2O35900 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.03■□□□□ 0.32
Lsm2O35900 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.03■□□□□ 0.32
Lsm2O35900 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.03■□□□□ 0.32
Lsm2O35900 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm2O35900 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm2O35900 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm2O35900 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm2O35900 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.02■□□□□ 0.32
Lsm2O35900 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Lsm2O35900 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Lsm2O35900 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lsm2O35900 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lsm2O35900 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm2O35900 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm2O35900 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Lsm2O35900 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm2O35900 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm2O35900 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Lsm2O35900 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms