Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf2O35218 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf2O35218 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cpsf2O35218 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.35■□□□□ 0.85
Cpsf2O35218 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf2O35218 Gm9847-201ENSMUST00000052528 599 ntBASIC20.35■□□□□ 0.85
Cpsf2O35218 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.35■□□□□ 0.85
Cpsf2O35218 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf2O35218 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf2O35218 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cpsf2O35218 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf2O35218 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cpsf2O35218 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf2O35218 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf2O35218 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf2O35218 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Cpsf2O35218 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cpsf2O35218 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.34■□□□□ 0.85
Cpsf2O35218 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Cpsf2O35218 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.34■□□□□ 0.85
Cpsf2O35218 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cpsf2O35218 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf2O35218 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf2O35218 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Cpsf2O35218 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.33■□□□□ 0.85
Cpsf2O35218 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf2O35218 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.33■□□□□ 0.85
Cpsf2O35218 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.33■□□□□ 0.85
Cpsf2O35218 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf2O35218 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf2O35218 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Cpsf2O35218 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.33■□□□□ 0.84
Cpsf2O35218 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf2O35218 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf2O35218 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf2O35218 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf2O35218 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf2O35218 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cpsf2O35218 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf2O35218 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf2O35218 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf2O35218 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf2O35218 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf2O35218 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf2O35218 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf2O35218 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.32■□□□□ 0.84
Cpsf2O35218 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf2O35218 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf2O35218 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Cpsf2O35218 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.31■□□□□ 0.84
Cpsf2O35218 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf2O35218 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.31■□□□□ 0.84
Cpsf2O35218 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf2O35218 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.31■□□□□ 0.84
Cpsf2O35218 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf2O35218 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf2O35218 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf2O35218 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf2O35218 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf2O35218 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Cpsf2O35218 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf2O35218 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf2O35218 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf2O35218 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf2O35218 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf2O35218 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf2O35218 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf2O35218 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cpsf2O35218 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf2O35218 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
Cpsf2O35218 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf2O35218 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf2O35218 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf2O35218 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf2O35218 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf2O35218 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cpsf2O35218 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cpsf2O35218 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Cpsf2O35218 Gm43137-201ENSMUST00000198052 594 ntBASIC20.29■□□□□ 0.84
Cpsf2O35218 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.29■□□□□ 0.84
Cpsf2O35218 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Cpsf2O35218 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf2O35218 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf2O35218 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf2O35218 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.29■□□□□ 0.84
Cpsf2O35218 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Cpsf2O35218 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms