Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col15a1O35206 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Col15a1O35206 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col15a1O35206 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Col15a1O35206 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col15a1O35206 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col15a1O35206 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Col15a1O35206 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Col15a1O35206 AC158538.1-201ENSMUST00000225870 294 ntBASIC24.8■■□□□ 1.56
Col15a1O35206 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Col15a1O35206 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col15a1O35206 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col15a1O35206 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col15a1O35206 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col15a1O35206 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col15a1O35206 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC24.79■■□□□ 1.56
Col15a1O35206 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col15a1O35206 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Col15a1O35206 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Col15a1O35206 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col15a1O35206 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
Col15a1O35206 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col15a1O35206 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC24.77■■□□□ 1.56
Col15a1O35206 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.77■■□□□ 1.56
Col15a1O35206 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col15a1O35206 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col15a1O35206 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col15a1O35206 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Col15a1O35206 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Col15a1O35206 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col15a1O35206 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Col15a1O35206 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Col15a1O35206 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Col15a1O35206 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
Col15a1O35206 Gm2559-201ENSMUST00000201323 363 ntBASIC24.76■■□□□ 1.55
Col15a1O35206 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC24.76■■□□□ 1.55
Col15a1O35206 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Col15a1O35206 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Col15a1O35206 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Col15a1O35206 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col15a1O35206 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Col15a1O35206 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Col15a1O35206 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.75■■□□□ 1.55
Col15a1O35206 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col15a1O35206 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col15a1O35206 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col15a1O35206 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col15a1O35206 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col15a1O35206 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC24.74■■□□□ 1.55
Col15a1O35206 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col15a1O35206 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Col15a1O35206 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC24.74■■□□□ 1.55
Col15a1O35206 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col15a1O35206 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col15a1O35206 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col15a1O35206 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Col15a1O35206 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col15a1O35206 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC24.74■■□□□ 1.55
Col15a1O35206 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.73■■□□□ 1.55
Col15a1O35206 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col15a1O35206 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col15a1O35206 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col15a1O35206 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC24.73■■□□□ 1.55
Col15a1O35206 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Col15a1O35206 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col15a1O35206 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col15a1O35206 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Col15a1O35206 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col15a1O35206 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col15a1O35206 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col15a1O35206 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col15a1O35206 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col15a1O35206 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col15a1O35206 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Col15a1O35206 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col15a1O35206 Gm11249-201ENSMUST00000117071 859 ntBASIC24.71■■□□□ 1.55
Col15a1O35206 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC24.71■■□□□ 1.55
Col15a1O35206 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC24.71■■□□□ 1.55
Col15a1O35206 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col15a1O35206 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col15a1O35206 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Col15a1O35206 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Col15a1O35206 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Col15a1O35206 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
Col15a1O35206 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC24.7■■□□□ 1.55
Col15a1O35206 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC24.7■■□□□ 1.55
Col15a1O35206 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Col15a1O35206 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Col15a1O35206 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Col15a1O35206 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col15a1O35206 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC24.69■■□□□ 1.54
Col15a1O35206 Gm44549-201ENSMUST00000208351 577 ntBASIC24.69■■□□□ 1.54
Col15a1O35206 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col15a1O35206 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Col15a1O35206 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col15a1O35206 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col15a1O35206 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col15a1O35206 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.69■■□□□ 1.54
Col15a1O35206 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Col15a1O35206 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms