Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sec22bO08547 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sec22bO08547 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
Sec22bO08547 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sec22bO08547 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sec22bO08547 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sec22bO08547 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sec22bO08547 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sec22bO08547 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sec22bO08547 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sec22bO08547 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.87■□□□□ 0.61
Sec22bO08547 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sec22bO08547 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sec22bO08547 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.87■□□□□ 0.61
Sec22bO08547 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sec22bO08547 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sec22bO08547 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sec22bO08547 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec22bO08547 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec22bO08547 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sec22bO08547 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sec22bO08547 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec22bO08547 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec22bO08547 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec22bO08547 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec22bO08547 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec22bO08547 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sec22bO08547 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
Sec22bO08547 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec22bO08547 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec22bO08547 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec22bO08547 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sec22bO08547 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec22bO08547 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec22bO08547 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec22bO08547 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sec22bO08547 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Sec22bO08547 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sec22bO08547 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sec22bO08547 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sec22bO08547 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.84■□□□□ 0.61
Sec22bO08547 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sec22bO08547 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sec22bO08547 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sec22bO08547 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sec22bO08547 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Sec22bO08547 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sec22bO08547 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sec22bO08547 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sec22bO08547 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.84■□□□□ 0.61
Sec22bO08547 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sec22bO08547 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sec22bO08547 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.83■□□□□ 0.61
Sec22bO08547 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sec22bO08547 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sec22bO08547 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sec22bO08547 Gm12251-201ENSMUST00000117893 792 ntBASIC18.83■□□□□ 0.6
Sec22bO08547 Mir7075-201ENSMUST00000184187 82 ntBASIC18.83■□□□□ 0.6
Sec22bO08547 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Sec22bO08547 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sec22bO08547 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sec22bO08547 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.82■□□□□ 0.6
Sec22bO08547 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sec22bO08547 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.82■□□□□ 0.6
Sec22bO08547 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.82■□□□□ 0.6
Sec22bO08547 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Sec22bO08547 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sec22bO08547 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sec22bO08547 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.81■□□□□ 0.6
Sec22bO08547 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sec22bO08547 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sec22bO08547 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sec22bO08547 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec22bO08547 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec22bO08547 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec22bO08547 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec22bO08547 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Sec22bO08547 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec22bO08547 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sec22bO08547 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.81■□□□□ 0.6
Sec22bO08547 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec22bO08547 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec22bO08547 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec22bO08547 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sec22bO08547 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms