Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3727J3QM54 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3727J3QM54 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm3727J3QM54 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3727J3QM54 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3727J3QM54 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3727J3QM54 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3727J3QM54 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm3727J3QM54 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.28■□□□□ 0.2
Gm3727J3QM54 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.27■□□□□ 0.2
Gm3727J3QM54 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.27■□□□□ 0.2
Gm3727J3QM54 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.27■□□□□ 0.2
Gm3727J3QM54 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm3727J3QM54 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Gm3727J3QM54 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm3727J3QM54 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm3727J3QM54 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm3727J3QM54 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm3727J3QM54 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3727J3QM54 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3727J3QM54 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3727J3QM54 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3727J3QM54 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3727J3QM54 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3727J3QM54 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3727J3QM54 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.26■□□□□ 0.19
Gm3727J3QM54 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3727J3QM54 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Gm3727J3QM54 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3727J3QM54 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3727J3QM54 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3727J3QM54 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.26■□□□□ 0.19
Gm3727J3QM54 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Gm3727J3QM54 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm3727J3QM54 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.25■□□□□ 0.19
Gm3727J3QM54 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.25■□□□□ 0.19
Gm3727J3QM54 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Gm7332-201ENSMUST00000118351 454 ntBASIC16.25■□□□□ 0.19
Gm3727J3QM54 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm3727J3QM54 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm3727J3QM54 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm3727J3QM54 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.23■□□□□ 0.19
Gm3727J3QM54 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Gm3727J3QM54 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3727J3QM54 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Gm3727J3QM54 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3727J3QM54 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3727J3QM54 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3727J3QM54 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms